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The map label for this gene is traI [C]

Identifier: 189184317

GI number: 189184317

Start: 1446358

End: 1446801

Strand: Reverse

Name: traI [C]

Synonym: OTT_1410

Alternate gene names: 189184317

Gene position: 1446801-1446358 (Counterclockwise)

Preceding gene: 189184318

Following gene: 189184316

Centisome position: 72.02

GC content: 33.56

Gene sequence:

>444_bases
GTGCTTAGTTCAAATAGAATACTAGAATTATATCATGATGATGGTGAAAGTATCAAATATTTTACGACAATTGAGGTTCG
AAATGAGGAGACGAGAATAATCAGAATAGCTAATAAAATCAATAATCGAGTTTATTACAACGATATTTACAATCTTAAAA
GTGATATCGAAGGTCTAGCAAATGTTAGCGAAGAACAGAAACAAGCTCTAAGGCATATTTTGCTTAGCACTAGTCGAGTT
AGAGTCTTAAGAGGAAGAGCAGGTACAGGAAAATCTTATGTTTTAGCGAAAGCGTATAAGCTTGCAACAAATCGTGGACA
AAAAGTTATTGGTCTTGCTCCTACTCATAAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACGGTAA
AAGGATTTTTGTATAATCGAAAAAAAAATTTTTATGCAAAATAG

Upstream 100 bases:

>100_bases
TTCTATAACACATTACAAATCTATTTTTACTAAGCATGATGTTGAAAAAGCAGTAAAAGATATACCAGATCTAACAGCAA
GAGAACAGTTAGTTCAGAAA

Downstream 100 bases:

>100_bases
GTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATACAGAGCTGTTTGGAGTAGTTAGAAACAATAATT
GTCAACTGATACTTGCTGGA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: MobA/MobL Family Protein; Conjugal Transfer Protein TraA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLSSNRILELYHDDGESIKYFTTIEVRNEETRIIRIANKINNRVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSRV
RVLRGRAGTGKSYVLAKAYKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFYAK

Sequences:

>Translated_147_residues
MLSSNRILELYHDDGESIKYFTTIEVRNEETRIIRIANKINNRVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSRV
RVLRGRAGTGKSYVLAKAYKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFYAK
>Mature_147_residues
MLSSNRILELYHDDGESIKYFTTIEVRNEETRIIRIANKINNRVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSRV
RVLRGRAGTGKSYVLAKAYKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFYAK

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 16936; Mature: 16936

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSNRILELYHDDGESIKYFTTIEVRNEETRIIRIANKINNRVYYNDIYNLKSDIEGLA
CCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEHHHCCEEEEHHHHHHHHHHHHHH
NVSEEQKQALRHILLSTSRVRVLRGRAGTGKSYVLAKAYKLATNRGQKVIGLAPTHKAVS
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHH
ELRSKGYTEVYTVKGFLYNRKKNFYAK
HHHHCCCEEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MLSSNRILELYHDDGESIKYFTTIEVRNEETRIIRIANKINNRVYYNDIYNLKSDIEGLA
CCCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEHHHCCEEEEHHHHHHHHHHHHHH
NVSEEQKQALRHILLSTSRVRVLRGRAGTGKSYVLAKAYKLATNRGQKVIGLAPTHKAVS
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHH
ELRSKGYTEVYTVKGFLYNRKKNFYAK
HHHHCCCEEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA