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The map label for this gene is traA [H]

Identifier: 189184316

GI number: 189184316

Start: 1445505

End: 1446368

Strand: Reverse

Name: traA [H]

Synonym: OTT_1409

Alternate gene names: 189184316

Gene position: 1446368-1445505 (Counterclockwise)

Preceding gene: 189184317

Following gene: 189184314

Centisome position: 71.99

GC content: 34.03

Gene sequence:

>864_bases
ATGCAAAATAGGTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATACAGAGCTGTTTGGAGTAGTTAG
AAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAACAGCTAGCTTCAATAGAAAGAGGCGGAATGTTTGAGATGC
TGAGTAATATTTTTGGTTCACATGTTTTAGTAAATATTCGAAGACAAAGTGAAAACTGGAGCAGAGAAGCAGCAATGAAG
TTTGCTGAGAGTAATATTTTAAGTGGTATAACCTTACTGAGGCAAAATAACTGCGTTAAGTTTGACAATACATTAATAGA
CTCAATGAGTAAGTTAGTATACAACTGGAGTCTAAGCAAATTTAACACACATGAAAAATTGGTAATTACAGTACGTAATA
AAGATGTCGACATTCTTAATTCAAGTATTAGATCTTTGTTAAAAGCAAATGGTACGCTACAAGGCAAAGAATATAGGCGT
TCAATAGCTGGAAGGAAAGAGTCCTATATGGCAGGAGATAGAATCGTATTTCAAAAAAGCGATAAAGATTTACAAATACA
AAACAGTGAATTTGCAACTTTAACTTCGGTTAATAAAAATGAATTTGTAGCTAAGACAGACGCAGGAAAAGAGGTGAGTT
TTGATCCTAGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGCTTCTATAAAAGATGTA
TACGTTTTGCATAACGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTGCAGCTACA
TTGCAATAAGGAATCAACTAGAAGCATTAACAGCAGCTATACAAAGGTTAAAGTTCTCGTTTAG

Upstream 100 bases:

>100_bases
CTTGCTCCTACTCATAAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACGGTAAAAGGATTTTTGTA
TAATCGAAAAAAAAATTTTT

Downstream 100 bases:

>100_bases
AGCTATTCCATGCTTATGTAATGTAGGTAATAAAGCTCCACCAAAAGGTGACCAATAAATTATTTGTCCTCGTCTGCCAG
CTAGTAACATACCTGGAGAG

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQNRLIVVDEAGMVGTKAYTELFGVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAAMK
FAESNILSGITLLRQNNCVKFDNTLIDSMSKLVYNWSLSKFNTHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKEVSFDPSKIQFKHGYASTVYKVQGASIKDV
YVLHNGVSNISSSYVAMTRHIENLQLHCNKESTRSINSSYTKVKVLV

Sequences:

>Translated_287_residues
MQNRLIVVDEAGMVGTKAYTELFGVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAAMK
FAESNILSGITLLRQNNCVKFDNTLIDSMSKLVYNWSLSKFNTHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKEVSFDPSKIQFKHGYASTVYKVQGASIKDV
YVLHNGVSNISSSYVAMTRHIENLQLHCNKESTRSINSSYTKVKVLV
>Mature_287_residues
MQNRLIVVDEAGMVGTKAYTELFGVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAAMK
FAESNILSGITLLRQNNCVKFDNTLIDSMSKLVYNWSLSKFNTHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKEVSFDPSKIQFKHGYASTVYKVQGASIKDV
YVLHNGVSNISSSYVAMTRHIENLQLHCNKESTRSINSSYTKVKVLV

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 32280; Mature: 32280

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRLIVVDEAGMVGTKAYTELFGVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHEECCCEEEEEECCCHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSENWSREAAMKFAESNILSGITLLRQNNCVKFDNTLIDSMSKLVYNWSLSK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHCCCCCC
FNTHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRRSIAGRKESYMAGDRIVFQKS
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEC
DKDLQIQNSEFATLTSVNKNEFVAKTDAGKEVSFDPSKIQFKHGYASTVYKVQGASIKDV
CCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEE
YVLHNGVSNISSSYVAMTRHIENLQLHCNKESTRSINSSYTKVKVLV
EEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHHCCCCCCEEEEEEC
>Mature Secondary Structure
MQNRLIVVDEAGMVGTKAYTELFGVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHEECCCEEEEEECCCHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSENWSREAAMKFAESNILSGITLLRQNNCVKFDNTLIDSMSKLVYNWSLSK
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHCCCCCC
FNTHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRRSIAGRKESYMAGDRIVFQKS
CCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEC
DKDLQIQNSEFATLTSVNKNEFVAKTDAGKEVSFDPSKIQFKHGYASTVYKVQGASIKDV
CCCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEE
YVLHNGVSNISSSYVAMTRHIENLQLHCNKESTRSINSSYTKVKVLV
EEEECCHHHHHHHHHHHHHHHCCEEEEECCHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]