Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184264

Identifier: 189184264

GI number: 189184264

Start: 1385453

End: 1386178

Strand: Direct

Name: 189184264

Synonym: OTT_1357

Alternate gene names: NA

Gene position: 1385453-1386178 (Clockwise)

Preceding gene: 189184263

Following gene: 189184265

Centisome position: 68.96

GC content: 27.96

Gene sequence:

>726_bases
ATGATTGACGATGACGATAACAACGATGATAAATTAAAAAATAACCCTGATGATACTACTGATAAGAATGAGGATGAAGA
AGATACTAATAATTTGACCAAAAAATCCATCTTTACTTCTAGTCAAGATACTTCCTCTGATAACTTGGTCAATGAGTTTT
ACCAAAAATTAAAAAATAATGCAGAATTTGAAGCTGAATTAGAAGCATTAATTAGTAACTTTGAAATTAATCAAGATGTA
TCAAAGCTGCAAACAAACATTATACTATTAATTAAAAAATTACTGCTTAGTAATTCTTCAGGCTCTACATCTATAGAATT
AACTCAAGAGCTTGAACAGCAAATTACTAAGCAAATTGCTAAAATAAGTAAAGAGTTAATATATAAGCACACAAGAACCT
TAGCAGAAGAAAATCAAGATTTAGAGCAAAATAAAGATAACTTAGAATATATTTCTGAACCGTCTAGAGCAGAACTAAAG
AAAAATCTAAAAAGATTTGCAATATATGAAGTCTATAAACTGCTTAATCCAAGACGTATTGCAGGAGAAACACGTTTGAG
TAATTTTATTCATAATTTAATAATTGGAGGTGCAAAATATGCACTCAAGTATGGTGGAGGCAATAAAAATGATGTTAGTT
ATTATAATAATAAATTACAAGCAATGAAATTTCATAAAAAATCTGCTGAAAGAGGAGATAAAGATAAAGGAGGAAGAAAT
AGATAA

Upstream 100 bases:

>100_bases
ACTTTAATTTAAACCAAATTGTTAGCTTAAAACATGCATATCATAATCATAATTATGATATATTATAAGCTCTTATAAAT
CCTTATTCTGAATTTATGCT

Downstream 100 bases:

>100_bases
TAAAATAAAATATTGACTTTCTACTTAGAATTGCGTTATTGTTGTTTTATTGTAGTAATAAAAACTGATATAAAGGAAAG
GCTAGTTTACCATGAATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MIDDDDNNDDKLKNNPDDTTDKNEDEEDTNNLTKKSIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDV
SKLQTNIILLIKKLLLSNSSGSTSIELTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELK
KNLKRFAIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRN
R

Sequences:

>Translated_241_residues
MIDDDDNNDDKLKNNPDDTTDKNEDEEDTNNLTKKSIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDV
SKLQTNIILLIKKLLLSNSSGSTSIELTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELK
KNLKRFAIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRN
R
>Mature_241_residues
MIDDDDNNDDKLKNNPDDTTDKNEDEEDTNNLTKKSIFTSSQDTSSDNLVNEFYQKLKNNAEFEAELEALISNFEINQDV
SKLQTNIILLIKKLLLSNSSGSTSIELTQELEQQITKQIAKISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELK
KNLKRFAIYEVYKLLNPRRIAGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRN
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020171
- ProDom:   PD210227 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27675; Mature: 27675

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDDDDNNDDKLKNNPDDTTDKNEDEEDTNNLTKKSIFTSSQDTSSDNLVNEFYQKLKNN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
AEFEAELEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIELTQELEQQITKQIA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
AGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRN
HHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
R
C
>Mature Secondary Structure
MIDDDDNNDDKLKNNPDDTTDKNEDEEDTNNLTKKSIFTSSQDTSSDNLVNEFYQKLKNN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
AEFEAELEALISNFEINQDVSKLQTNIILLIKKLLLSNSSGSTSIELTQELEQQITKQIA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KISKELIYKHTRTLAEENQDLEQNKDNLEYISEPSRAELKKNLKRFAIYEVYKLLNPRRI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
AGETRLSNFIHNLIIGGAKYALKYGGGNKNDVSYYNNKLQAMKFHKKSAERGDKDKGGRN
HHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]