| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184265
Identifier: 189184265
GI number: 189184265
Start: 1386270
End: 1387523
Strand: Direct
Name: 189184265
Synonym: OTT_1358
Alternate gene names: NA
Gene position: 1386270-1387523 (Clockwise)
Preceding gene: 189184264
Following gene: 189184266
Centisome position: 69.0
GC content: 33.89
Gene sequence:
>1254_bases ATGAATCCAGAGGATATTGCATTAGTTCAAGAGGTGGCTGAATTAATACAGAATAGGCAACATTTACAAGCAAGAATATT AGTTAAAACTCGCGGTGGTTTTTCAGACAATAATGCTGCTACTAGTGAATTATATTCAAGAGTTCCAGAAGAGTTAGCAT TGGAGTTTGTGTCTTTTTGTGAAAATATGGAAAACTGTAAAAACTCTGATAGGTATGCAGCATTATTTTTAAATAGCGAC TTTCCTATTAATGAAGGTGATTATTGTAGTCACATAGCAATGGATTTTTATTCGCAAGGTAGGCTTAATGAACAAACAGC CAACTCAGTTTTTGGAGGCATGCCCGTTAGTCGTGCAATTGAAGCAACATTAATGAATCCACACAATGCAGCAACTGGTC TACTAAATGTTTTGCTTAGTTATGCGATTAAAACTAATCTAAGATATCAATGTAAAGATAAAGATGAGGAATCATTTGAA GCTGCAAAAATAGGTCTCTGTAGTCACTGGTTAAGTATAGTTTCAGTAAATGTAGATGATATAAATGATTATGAATCTAA ACAAAGAATTAGCTGCATTTTAGAAAACAGTGGCAATTCTAGTAAACTTATAAATTTAGATCCTGGTACAGTACACATAC TGATGTTTCGTTTGCTAGATCGAAATCGCGCAGAAAGCGCTAAACTATTACTCGATAGTGGATTAGATGTTGGCGCTTTA CAAAAAAAATATTCAGAGACAGGATGGCTAACTATTCTAGATGCAGCTATTGATCGTAATAACTATGATTGTGCTAAGAT ATTAGTACAACGTGGCGTTGATATAGTAGATGATCACAATAATACGTCTTCTGAAATGAAAGCCTTGTGTAATACACATC AATTTTTTAAAAATACTGGTTATTTCAAAGAGCATAAATCTATACCAGATCAAATGTTAGATGAGTCGCTAGAAATAAGT AGTTTTATTACACAAGATAAGAGTCTTCGCGATAGTTGCTGGCCTGCATTAAAAAGCAGTGTTAATAGTGAAATACTTCT CTCTCAAATGGCTTATGAGTTTAGATGCGATCAATCTTTACTTCCATATTTTATGGAATTAACGCAATTAGAGTTGTCAA AGTTAAATGTGCAATCAGATGCAAGTGCTGCAAGTATGGATGATGATAGTAAAGAATGTAGTAGTACTATACATAGAGAT CAGTATATTGCTAGGAAAAGTAGCCCCTCAACTACAGATCGAGGCTTGAAATAG
Upstream 100 bases:
>100_bases AATAGATAATAAAATAAAATATTGACTTTCTACTTAGAATTGCGTTATTGTTGTTTTATTGTAGTAATAAAAACTGATAT AAAGGAAAGGCTAGTTTACC
Downstream 100 bases:
>100_bases CAGTAAGATAATAAAATGCAGAAACTGTAGTGCATATGAAACATTTTTTGACGGTTATCTTATTACTAGTGAAATTCAGT ATTGCAGTCGCATAGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD QYIARKSSPSTTDRGLK
Sequences:
>Translated_417_residues MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD QYIARKSSPSTTDRGLK >Mature_417_residues MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD QYIARKSSPSTTDRGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46865; Mature: 46865
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFC CCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHH ENMENCKNSDRYAALFLNSDFPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAI HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH EATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFEAAKIGLCSHWLSIVSVNVDD HHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC INDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL CCCHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTG HHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCC YFKEHKSIPDQMLDESLEISSFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSL CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH LPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRDQYIARKSSPSTTDRGLK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFC CCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHH ENMENCKNSDRYAALFLNSDFPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAI HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH EATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFEAAKIGLCSHWLSIVSVNVDD HHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC INDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL CCCHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTG HHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCC YFKEHKSIPDQMLDESLEISSFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSL CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH LPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRDQYIARKSSPSTTDRGLK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA