Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184265

Identifier: 189184265

GI number: 189184265

Start: 1386270

End: 1387523

Strand: Direct

Name: 189184265

Synonym: OTT_1358

Alternate gene names: NA

Gene position: 1386270-1387523 (Clockwise)

Preceding gene: 189184264

Following gene: 189184266

Centisome position: 69.0

GC content: 33.89

Gene sequence:

>1254_bases
ATGAATCCAGAGGATATTGCATTAGTTCAAGAGGTGGCTGAATTAATACAGAATAGGCAACATTTACAAGCAAGAATATT
AGTTAAAACTCGCGGTGGTTTTTCAGACAATAATGCTGCTACTAGTGAATTATATTCAAGAGTTCCAGAAGAGTTAGCAT
TGGAGTTTGTGTCTTTTTGTGAAAATATGGAAAACTGTAAAAACTCTGATAGGTATGCAGCATTATTTTTAAATAGCGAC
TTTCCTATTAATGAAGGTGATTATTGTAGTCACATAGCAATGGATTTTTATTCGCAAGGTAGGCTTAATGAACAAACAGC
CAACTCAGTTTTTGGAGGCATGCCCGTTAGTCGTGCAATTGAAGCAACATTAATGAATCCACACAATGCAGCAACTGGTC
TACTAAATGTTTTGCTTAGTTATGCGATTAAAACTAATCTAAGATATCAATGTAAAGATAAAGATGAGGAATCATTTGAA
GCTGCAAAAATAGGTCTCTGTAGTCACTGGTTAAGTATAGTTTCAGTAAATGTAGATGATATAAATGATTATGAATCTAA
ACAAAGAATTAGCTGCATTTTAGAAAACAGTGGCAATTCTAGTAAACTTATAAATTTAGATCCTGGTACAGTACACATAC
TGATGTTTCGTTTGCTAGATCGAAATCGCGCAGAAAGCGCTAAACTATTACTCGATAGTGGATTAGATGTTGGCGCTTTA
CAAAAAAAATATTCAGAGACAGGATGGCTAACTATTCTAGATGCAGCTATTGATCGTAATAACTATGATTGTGCTAAGAT
ATTAGTACAACGTGGCGTTGATATAGTAGATGATCACAATAATACGTCTTCTGAAATGAAAGCCTTGTGTAATACACATC
AATTTTTTAAAAATACTGGTTATTTCAAAGAGCATAAATCTATACCAGATCAAATGTTAGATGAGTCGCTAGAAATAAGT
AGTTTTATTACACAAGATAAGAGTCTTCGCGATAGTTGCTGGCCTGCATTAAAAAGCAGTGTTAATAGTGAAATACTTCT
CTCTCAAATGGCTTATGAGTTTAGATGCGATCAATCTTTACTTCCATATTTTATGGAATTAACGCAATTAGAGTTGTCAA
AGTTAAATGTGCAATCAGATGCAAGTGCTGCAAGTATGGATGATGATAGTAAAGAATGTAGTAGTACTATACATAGAGAT
CAGTATATTGCTAGGAAAAGTAGCCCCTCAACTACAGATCGAGGCTTGAAATAG

Upstream 100 bases:

>100_bases
AATAGATAATAAAATAAAATATTGACTTTCTACTTAGAATTGCGTTATTGTTGTTTTATTGTAGTAATAAAAACTGATAT
AAAGGAAAGGCTAGTTTACC

Downstream 100 bases:

>100_bases
CAGTAAGATAATAAAATGCAGAAACTGTAGTGCATATGAAACATTTTTTGACGGTTATCTTATTACTAGTGAAATTCAGT
ATTGCAGTCGCATAGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD
FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE
AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL
QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS
SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD
QYIARKSSPSTTDRGLK

Sequences:

>Translated_417_residues
MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD
FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE
AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL
QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS
SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD
QYIARKSSPSTTDRGLK
>Mature_417_residues
MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFCENMENCKNSDRYAALFLNSD
FPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAIEATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFE
AAKIGLCSHWLSIVSVNVDDINDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL
QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTGYFKEHKSIPDQMLDESLEIS
SFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSLLPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRD
QYIARKSSPSTTDRGLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46865; Mature: 46865

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFC
CCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ENMENCKNSDRYAALFLNSDFPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAI
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH
EATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFEAAKIGLCSHWLSIVSVNVDD
HHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
INDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL
CCCHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTG
HHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
YFKEHKSIPDQMLDESLEISSFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSL
CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
LPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRDQYIARKSSPSTTDRGLK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNPEDIALVQEVAELIQNRQHLQARILVKTRGGFSDNNAATSELYSRVPEELALEFVSFC
CCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHH
ENMENCKNSDRYAALFLNSDFPINEGDYCSHIAMDFYSQGRLNEQTANSVFGGMPVSRAI
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH
EATLMNPHNAATGLLNVLLSYAIKTNLRYQCKDKDEESFEAAKIGLCSHWLSIVSVNVDD
HHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
INDYESKQRISCILENSGNSSKLINLDPGTVHILMFRLLDRNRAESAKLLLDSGLDVGAL
CCCHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
QKKYSETGWLTILDAAIDRNNYDCAKILVQRGVDIVDDHNNTSSEMKALCNTHQFFKNTG
HHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
YFKEHKSIPDQMLDESLEISSFITQDKSLRDSCWPALKSSVNSEILLSQMAYEFRCDQSL
CCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
LPYFMELTQLELSKLNVQSDASAASMDDDSKECSSTIHRDQYIARKSSPSTTDRGLK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA