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The map label for this gene is traA [H]

Identifier: 189184186

GI number: 189184186

Start: 1302432

End: 1302779

Strand: Reverse

Name: traA [H]

Synonym: OTT_1279

Alternate gene names: 189184186

Gene position: 1302779-1302432 (Counterclockwise)

Preceding gene: 189184187

Following gene: 189184185

Centisome position: 64.85

GC content: 35.34

Gene sequence:

>348_bases
ATGCAAAGCAGCTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATGCAGAGCTGTTTAGAGTAGTTAG
AAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAGCAGTTAGCTTCAATAGAAAGAGGCGGAATGTTTGAGATGC
TGAGTAATATTTTTGGTTCACATGTTTTAGTGAATATTCGAAGACAAAGTGAAAACTGGAGCAGAGAAGCAGCAACAAAG
TTTGCTGAAAGTAACATTTTAAGCGGCATAACCTTACTGAGGCAAAATAACTGCGTTAAGTTTGACAATACATTAATAGA
GTCAATGAGTAAGTTGATTTATGATTGA

Upstream 100 bases:

>100_bases
TTGCTCCAACTCATAAGGCAGTATCAGAGCTGAAGAGCAAAGGTTATACTGAGGTCTATACAGTAAAGGGATTTTTGTAT
AATCGAAAAAAAAAATTTTT

Downstream 100 bases:

>100_bases
AGTTTGAGCAAATTTAAACCACATGAAAAACTGGTAATTACAGTACGTAATAAAGATGTCGACATTCTTAATTCAAGTAT
TAGGTCTTTGTTAAAAGCGA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MQSSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAATK
FAESNILSGITLLRQNNCVKFDNTLIESMSKLIYD

Sequences:

>Translated_115_residues
MQSSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAATK
FAESNILSGITLLRQNNCVKFDNTLIESMSKLIYD
>Mature_115_residues
MQSSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSENWSREAATK
FAESNILSGITLLRQNNCVKFDNTLIESMSKLIYD

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 12904; Mature: 12904

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSENWSREAATKFAESNILSGITLLRQNNCVKFDNTLIESMSKLIYD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSENWSREAATKFAESNILSGITLLRQNNCVKFDNTLIESMSKLIYD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]