Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184185

Identifier: 189184185

GI number: 189184185

Start: 1301221

End: 1302066

Strand: Reverse

Name: 189184185

Synonym: OTT_1278

Alternate gene names: NA

Gene position: 1302066-1301221 (Counterclockwise)

Preceding gene: 189184186

Following gene: 189184180

Centisome position: 64.81

GC content: 32.15

Gene sequence:

>846_bases
TTGTATAATAAATCGTCATCTCTATACTATTTAAAACAAGAAGAGGAAGCTAAGGTGGAAGCGATAGTAGTAAACAAATT
TTTAGAAAACCATACAGGAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAGGGCAAATATGGTTTTTGATGAAG
AGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGACAAAGATGAAATTACTGGAGCTAAGATATTAGCT
CTGAATTCAAAAACATGTAATAAAGCTGATGTAGCTGAAAAATCTGTTGGTACAATTAGTGGATCATTTGCTGAAATTGC
TCAACAAAATTCAAAATACTCACCTGTAACAATCATTACAAAGGATATTGAAACAGCGTTAACCATTCAGCAAGCTAGAG
TCGAAGGCAAAATCTTATGTGCAATTGAAGCAGAAAATTTGCAAAACTATAATCCTGGCCCAAAAGAAAAGATCATTCTA
GCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGATAAGGAAGCAGTAGTCTGTACAGTCAAAAA
TGACTTCAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAGCCCTGAAAATCGAATTTGTGGTA
GCAGTTCATTAAGCATATTAGTTTTACCAGTACCTGTTGTTCCAGTAATAAGAATATGTAGCCTTTCACTATTCTTTACT
AATAGCAAGTCTCCAAAACAGATTTTCGAGGCCTTTTTAGCGCTTTTTAGCATTTTGGCTAGATTTCTACTCCGTACAAA
ATCAGCACCTCTAATTTTGGCTTTAATAATCGTTTTTTTACCTTGA

Upstream 100 bases:

>100_bases
TGAAATTACTAAACTGACTAAGGCAGTTGAAACAACCAAACTTACTCAAACAGAAAATAATAGTATAGCAAAACAAAATG
ATATTACAAATGTTAAAGAA

Downstream 100 bases:

>100_bases
GCTGTAAAGAAAACAATTGAGATTATCACACCAATAGCAAAAACAATTAATCCTTCTAATAATGCTGAATTGATTAGGAA
TTCCCATAATTGCTGTATTT

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNDKDEITGAKILA
LNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIIL
AVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPENRICGSSSLSILVLPVPVVPVIRICSLSLFFT
NSKSPKQIFEAFLALFSILARFLLRTKSAPLILALIIVFLP

Sequences:

>Translated_281_residues
MYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNDKDEITGAKILA
LNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIIL
AVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPENRICGSSSLSILVLPVPVVPVIRICSLSLFFT
NSKSPKQIFEAFLALFSILARFLLRTKSAPLILALIIVFLP
>Mature_281_residues
MYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNDKDEITGAKILA
LNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIIL
AVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPENRICGSSSLSILVLPVPVVPVIRICSLSLFFT
NSKSPKQIFEAFLALFSILARFLLRTKSAPLILALIIVFLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31150; Mature: 31150

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWP
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCC
ALTIFVKNDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIIT
EEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEE
KDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEA
CCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCE
VVCTVKNDFNNVLKTQGLYAVRNIISPENRICGSSSLSILVLPVPVVPVIRICSLSLFFT
EEEEEECHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEEEEE
NSKSPKQIFEAFLALFSILARFLLRTKSAPLILALIIVFLP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWP
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCC
ALTIFVKNDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIIT
EEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEE
KDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEA
CCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCE
VVCTVKNDFNNVLKTQGLYAVRNIISPENRICGSSSLSILVLPVPVVPVIRICSLSLFFT
EEEEEECHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEEEEE
NSKSPKQIFEAFLALFSILARFLLRTKSAPLILALIIVFLP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA