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The map label for this gene is traN [H]

Identifier: 189184177

GI number: 189184177

Start: 1294405

End: 1296096

Strand: Direct

Name: traN [H]

Synonym: OTT_1270

Alternate gene names: 189184177

Gene position: 1294405-1296096 (Clockwise)

Preceding gene: 189184176

Following gene: 189184178

Centisome position: 64.43

GC content: 33.33

Gene sequence:

>1692_bases
ATGAGATTATTATCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAAAGCAGTTATAATGA
AGCTAAAAACTATAATGTAAATCTTGGAAATTCTTCAAATACACAAGAATTATTTCATCAAGGTAGTAATGTCAATTATC
CTAACAATGATGAGGATTTAACCTATCATGGCCGTAATCAGCTTGGTACAGAAAGTGTGGCAATGTTATTTCAAGCTGAA
AACAGTAAAAACAATGCCTTAACTCAACATAATATCAACGATCAAAATTATATGATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGTGCCCTTGATAGCAGTAACTTCGTAACTCAGACAAGTACAACTAATACTGAAATTATTCAAAGTTGTA
CTGAAGGCAGTAATTTCAATATTGAACTTATTCGAGAATTAAACGTTGAGTGCAGATTAGAGAATGTATGGCTTCCATGG
CAAAACCGGCAAATGGAATTTGCAACAGAAAAAATAAAGGAGAATCATAGTAATTGGCTTAAGAGTCGTAGCGATGTCTA
TGATGAATCAGGTTCACAAATATACTGCCTAGTAGATGATCCCGAAGCAATTGAAAGACAAATGAAAAGGGCTATTGCTA
ATAGGCTTGGTGCATCTACACAGCATATTGGTAGAAATTTTTTATTAGAAGTAAATGAAAAAATATGTATACTTCACTAT
GACTACAGAGACAAGACTCAAGAACTAAGGAAAGTAGCAGAATATTGGAAAGTTTTAAACCCTGAACTTGAGCAATTAAC
AGAAAGTAACGAATGCTATGAGGTCAATAGAATCAACTATGATGGTGGTGATAGAGTATTTTTTGACAAGTTTAAAGTCA
ATCGTCCATATTGGAAACAAAAGATTGTTTTTTCTTGTACTAGCGATCCAAAAGATGGTTGCAAACACCTTAAAATTCAA
AATTGCGAATTAAAAAACAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTCTGGCAGCACGATTATAGCTGTTC
AACTGAGAAGCAAACAATGCTACACTCATCGTTGCGTAATAACTCAATCTTTTGTTTAGGAGGCAATTGCAATACTCCAA
CTATTATACCAAACAGAGATATAGCTAAAGTAGCTCATCTAGCGATGCTAAATCAGATGAGCAAAGATATTAAAACAAAT
CCTGTTTCTGTATTTTCAGGTAAACATCGAAAATGCAAAAAAGATGTATTTAGTTTTTTGAATTGCTGTTCTTCAATGAC
TGGCTGGGGGCGTGATATAGGCTTATCACAATGCAAATCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTTACT
GCTACTATATTGGAACCTACTGTTCTTCAAGAATTCCGATATTAGGTATTTGCTTAGCTAGGAAGTCTACTTATTGCTGC
TTTCAGTCGAAACTGGCAAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAAATAGACTTTGGAACACCTGAATGTCC
AAAGTGTAGAGGCCTTACTGTTAAGGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGACGAACTATTTGGTGATA
TACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACGAAAT
CAACATTATTGA

Upstream 100 bases:

>100_bases
CTGTGATAGTAATAGATGATGAAAAAAGAGGATTAACCAAGAAATTAACTGGCCATATTCCTTTAGCAATAGCATTAGAA
ATTATGAATGAGAATACTCA

Downstream 100 bases:

>100_bases
GGTACTTATTGAACTAGTAAATACAATAATTACTAATACAATTAGTAATTATTGTATTATTTATTGCTTTATATTAATAT
TTTTTTGATGTATAATAATA

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRLLSILTLITLNISCCLASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESVAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGSQIYCLVDDPEAIERQMKRAIANRLGASTQHIGRNFLLEVNEKICILHY
DYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQRN
QHY

Sequences:

>Translated_563_residues
MRLLSILTLITLNISCCLASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESVAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGSQIYCLVDDPEAIERQMKRAIANRLGASTQHIGRNFLLEVNEKICILHY
DYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQRN
QHY
>Mature_563_residues
MRLLSILTLITLNISCCLASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESVAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGSQIYCLVDDPEAIERQMKRAIANRLGASTQHIGRNFLLEVNEKICILHY
DYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKIQ
NCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTN
PVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
FQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQRN
QHY

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 64795; Mature: 64795

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSILTLITLNISCCLASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESVAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPWQNRQMEFATEKIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDESGSQIYCLVDDPEAIERQMKRAIANRLGASTQHIGRNFLLEVNEKICILHY
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCEEEEEE
DYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQ
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHC
KIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRN
EEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFL
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
NCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
HHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHHH
FQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQN
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCEECCHHHHHHHHHHHHHH
SMNKDIIAGIKDKVHRMQRNQHY
HCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLLSILTLITLNISCCLASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESVAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLENVWLPWQNRQMEFATEKIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDESGSQIYCLVDDPEAIERQMKRAIANRLGASTQHIGRNFLLEVNEKICILHY
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCEEEEEE
DYRDKTQELRKVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFKVNRPYWKQ
CCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHC
KIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRN
EEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHCC
NSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFL
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
NCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCC
HHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHHH
FQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQN
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCEECCHHHHHHHHHHHHHH
SMNKDIIAGIKDKVHRMQRNQHY
HCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]