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The map label for this gene is trbC [C]

Identifier: 189184176

GI number: 189184176

Start: 1294025

End: 1294408

Strand: Direct

Name: trbC [C]

Synonym: OTT_1269

Alternate gene names: 189184176

Gene position: 1294025-1294408 (Clockwise)

Preceding gene: 189184175

Following gene: 189184177

Centisome position: 64.41

GC content: 29.69

Gene sequence:

>384_bases
ATGGTTATACGAGTAATGATGTTGATGGTTTTATTATTTGTTAATAATGCTAATGCTTTTTTTTTGGACAAGCAAAAAAC
TTTTATTTTTGTCTCATTTTCAATGAGTGATGAGGCTTTAAAAAGCTATTTCGCTGAGTCTCAAAAGGCTGGAGCTCAAT
TGATTATGCGTGGGTTAATTAATAACTCATTTACACAAACAAAGAATAAAACTATGGAGCTTGATATTAGCTTCAATATA
GATCCTAGCTTGTTTGAACAATATAAAATTGATGTTGTACCTGTGATAGTAATAGATGATGAAAAAAGAGGATTAACCAA
GAAATTAACTGGCCATATTCCTTTAGCAATAGCATTAGAAATTATGAATGAGAATACTCAATGA

Upstream 100 bases:

>100_bases
GCTGGTAGAGAATTTCCAGTTAATGGTGAAGATTTCGGTTACTTGATTTGGCGAAAAAGAGATTGCTGTTTGCTTTGATT
TATAAAGCTTGGAGAGGAAT

Downstream 100 bases:

>100_bases
GATTATTATCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAAAGCAGTTATAATGAAGCT
AAAAACTATAATGTAAATCT

Product: putative conjugative transfer protein TrbC

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLIMRGLINNSFTQTKNKTMELDISFNI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMNENTQ

Sequences:

>Translated_127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLIMRGLINNSFTQTKNKTMELDISFNI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMNENTQ
>Mature_127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLIMRGLINNSFTQTKNKTMELDISFNI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMNENTQ

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14472; Mature: 14472

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLIMRGLI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NNSFTQTKNKTMELDISFNIDPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALE
CCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEE
IMNENTQ
EECCCCC
>Mature Secondary Structure
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLIMRGLI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NNSFTQTKNKTMELDISFNIDPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALE
CCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEE
IMNENTQ
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA