| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184178
Identifier: 189184178
GI number: 189184178
Start: 1296255
End: 1297055
Strand: Direct
Name: 189184178
Synonym: OTT_1271
Alternate gene names: NA
Gene position: 1296255-1297055 (Clockwise)
Preceding gene: 189184177
Following gene: 189184179
Centisome position: 64.52
GC content: 34.33
Gene sequence:
>801_bases ATGAATAATAATGATTTATTGCGTGAGTTATGTAACGCTGCTAAAAATGGAAATATAGAAAGTATAAAGCAGCTTCTAGC ACAAAATAATGCTGTTAATGCTATCAATTTACAAGATAATAATGGTCAAACTCCTTTACATTTTGTCACTAAGCATCGCT TTATAAAAATTACTGCTCCTCTTAATTGCAAAGAATACTGGAGTAGTTATGATAATCGTGACAAAGGATTTGTAGATGTA GCAAAGCTTCTATTGAATGCAGGAGCAAATCCAAATAAACAAGATAATAATGGTCAAACTCCTTTACATTTAGCTATTGA ATGGCACTATTTACCTGCGAAGTTGGTAATGTCAGCCAGAGATGAAGTAGATATCCCGTGTCGCTCAACAGATTTGATAA ATGTATTATGTGAGAGTAATTGTATTAATTTTGGTTTAAAGAATGTAGATGGTCGTACCGCTGTAGATCTAGCCTTATTT CTTAAATCTGATAAGCATGATGATGGGATTGCAGAGCACTTACAAGAGAAAAGGCTATTATGGAGGAAAGAACAAATAAA GGTTGCAAATAACTCGCTGGTAATAATAGCGGAAAATAAGGAGCAGATATTAAAATTAAAACCCGATTCAGAAAAAACAG ATGCTGATAAATTTTTGGAAAATTGGCGTGAGTTAGCACGTCTCGGACTGGATGAGCAGATATTAGACACATTGCAGGAT GATTATTTGGGAACATTTCAACAGCTTAACGAAGAACGTAAAGTAGCGTTGGGAGAGGACAGTATTCATGGAATGATTTA A
Upstream 100 bases:
>100_bases ATTTATTGCTTTATATTAATATTTTTTTGATGTATAATAATAAAACACATAAACTGTGTATAGTTATTGTATATTAAAAT TAAAATATGGTTAAAAATTA
Downstream 100 bases:
>100_bases GATTTGATGACATCTATTTTTAGTTGCTTTGTTTTGATTTGTTATGTTCTTAGATTTGTAGTAACTAGTATTATCGCAAA TAAGATAATAACTATTATGG
Product: ankyrin repeat-containing protein 16
Products: NA
Alternate protein names: Ankyrin Repeat-Containing
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNNNDLLRELCNAAKNGNIESIKQLLAQNNAVNAINLQDNNGQTPLHFVTKHRFIKITAPLNCKEYWSSYDNRDKGFVDV AKLLLNAGANPNKQDNNGQTPLHLAIEWHYLPAKLVMSARDEVDIPCRSTDLINVLCESNCINFGLKNVDGRTAVDLALF LKSDKHDDGIAEHLQEKRLLWRKEQIKVANNSLVIIAENKEQILKLKPDSEKTDADKFLENWRELARLGLDEQILDTLQD DYLGTFQQLNEERKVALGEDSIHGMI
Sequences:
>Translated_266_residues MNNNDLLRELCNAAKNGNIESIKQLLAQNNAVNAINLQDNNGQTPLHFVTKHRFIKITAPLNCKEYWSSYDNRDKGFVDV AKLLLNAGANPNKQDNNGQTPLHLAIEWHYLPAKLVMSARDEVDIPCRSTDLINVLCESNCINFGLKNVDGRTAVDLALF LKSDKHDDGIAEHLQEKRLLWRKEQIKVANNSLVIIAENKEQILKLKPDSEKTDADKFLENWRELARLGLDEQILDTLQD DYLGTFQQLNEERKVALGEDSIHGMI >Mature_266_residues MNNNDLLRELCNAAKNGNIESIKQLLAQNNAVNAINLQDNNGQTPLHFVTKHRFIKITAPLNCKEYWSSYDNRDKGFVDV AKLLLNAGANPNKQDNNGQTPLHLAIEWHYLPAKLVMSARDEVDIPCRSTDLINVLCESNCINFGLKNVDGRTAVDLALF LKSDKHDDGIAEHLQEKRLLWRKEQIKVANNSLVIIAENKEQILKLKPDSEKTDADKFLENWRELARLGLDEQILDTLQD DYLGTFQQLNEERKVALGEDSIHGMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30196; Mature: 30196
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNDLLRELCNAAKNGNIESIKQLLAQNNAVNAINLQDNNGQTPLHFVTKHRFIKITAP CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCEEEEEECC LNCKEYWSSYDNRDKGFVDVAKLLLNAGANPNKQDNNGQTPLHLAIEWHYLPAKLVMSAR CCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHCC DEVDIPCRSTDLINVLCESNCINFGLKNVDGRTAVDLALFLKSDKHDDGIAEHLQEKRLL CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH WRKEQIKVANNSLVIIAENKEQILKLKPDSEKTDADKFLENWRELARLGLDEQILDTLQD HHHHHHEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH DYLGTFQQLNEERKVALGEDSIHGMI HHHHHHHHHCHHHCEECCCCCCCCCC >Mature Secondary Structure MNNNDLLRELCNAAKNGNIESIKQLLAQNNAVNAINLQDNNGQTPLHFVTKHRFIKITAP CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEECCEEEEEECC LNCKEYWSSYDNRDKGFVDVAKLLLNAGANPNKQDNNGQTPLHLAIEWHYLPAKLVMSAR CCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHCC DEVDIPCRSTDLINVLCESNCINFGLKNVDGRTAVDLALFLKSDKHDDGIAEHLQEKRLL CCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH WRKEQIKVANNSLVIIAENKEQILKLKPDSEKTDADKFLENWRELARLGLDEQILDTLQD HHHHHHEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH DYLGTFQQLNEERKVALGEDSIHGMI HHHHHHHHHCHHHCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA