Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184003

Identifier: 189184003

GI number: 189184003

Start: 1125575

End: 1125898

Strand: Reverse

Name: 189184003

Synonym: OTT_1096

Alternate gene names: NA

Gene position: 1125898-1125575 (Counterclockwise)

Preceding gene: 189184004

Following gene: 189184002

Centisome position: 56.04

GC content: 25.31

Gene sequence:

>324_bases
ATGGATAAGGTAGAAGCAGAAAAAATTGCTTTTGAGGTTGCTAAAATCAACAATGAAATACCTGAAGATTTGGATGATCA
TATTAATGATGGCAACTTTTCTACTAAACGAGATATACAAGAAATTTTTAATAAAAAATCTGAGGAGTTAAAATGTCAAA
ACGCTAATTATATAAATAATAAGGCTTATAATAATAATAATAATATAGAACAAATTTTTAGTGATAACGAAAAAATAGAG
AATCTTAATCGAATTTCTGATAATAGATCTCTTTCGAAACTCGTTAAGGTAGTTCAAAATTATAAATGCCAGAGATCAAA
TTAA

Upstream 100 bases:

>100_bases
AATTATGTATCCCAAAAACTCTACTACTATTGATCGTAATATTAATGAATGAAATTATGGCTCGAAATCCTGAAATAACA
AGCAAGGAGCAAGCAGCTAG

Downstream 100 bases:

>100_bases
ATCTAAAACCGAATCTTTTACGTCTATTTCGATATTTATCAGCAATAATTTTGAACTACCTTAACGAGTTTCGAAAGAGG
TCTAATATTAAAAATGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE
NLNRISDNRSLSKLVKVVQNYKCQRSN

Sequences:

>Translated_107_residues
MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE
NLNRISDNRSLSKLVKVVQNYKCQRSN
>Mature_107_residues
MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE
NLNRISDNRSLSKLVKVVQNYKCQRSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12524; Mature: 12524

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINN
CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
KAYNNNNNIEQIFSDNEKIENLNRISDNRSLSKLVKVVQNYKCQRSN
CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINN
CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
KAYNNNNNIEQIFSDNEKIENLNRISDNRSLSKLVKVVQNYKCQRSN
CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA