Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183877

Identifier: 189183877

GI number: 189183877

Start: 1017114

End: 1017746

Strand: Reverse

Name: 189183877

Synonym: OTT_0970

Alternate gene names: NA

Gene position: 1017746-1017114 (Counterclockwise)

Preceding gene: 189183878

Following gene: 189183870

Centisome position: 50.66

GC content: 23.85

Gene sequence:

>633_bases
ATGATAAACCAACGCATTATTTATCTCAAAAACCTAATATGTTTCAAGATAGTGCTATATGGCATAATAATATTATTATG
CCATATTTATGGTTCATATTTATACACCCATTTTGAAATACTAAATACAAAAATTCAAAAAAATAAGAAGCATCTGGAAA
TTTTACAAAACAAATATAATTCAGCTATAGAATTACTAAATAATTCAGCTTTACAAAAAAAAATAAAGCCAATACTTCAG
CAAAAGCTATCACAACCTTATGATAGAAATAAGTTAATTGAGCATTATACTAATATTAGTAAAAAATGGAAATTATATAA
TTTTAATGTTAGTGTTTCATCACCATATCAATTTCAACCAAATAATTATTATAATAGAAAAATATCTATCGAAAACAGAG
ATGTTTTCTTAAGCTTCTACATTCCAGAATTTTCTAATTTGATGCCATTAATTACAGATATTTATAATCTTACTCCTCAA
TATACAACAATAGAAAAATTGCAAGCACTTTACAATACTCCAATTTGCTTAAACAATGTACATGATATATGTACTGATAA
ATTACATATATTTGTAAAAATGAAACTCAACCTATCGCAGGTAAAAAAATTTGATATACAATCCAAACCTTAA

Upstream 100 bases:

>100_bases
TATGAAGTTAATTTAACATCTTTAGGACAAGAAATATGTAGCCATTCTAATGTATCAAGAAAATTGCTAACCATGTCTAT
TAGTAGGATAGTTAATTAAT

Downstream 100 bases:

>100_bases
ATAGAATATGCTAAGTTATAGCTTCAGCGCTAGATATAACTTCTATCAATTCTTTAGTAACGGCAGCTTGTCTTGATCGA
TTAAGTTGTATAGTTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MINQRIIYLKNLICFKIVLYGIIILLCHIYGSYLYTHFEILNTKIQKNKKHLEILQNKYNSAIELLNNSALQKKIKPILQ
QKLSQPYDRNKLIEHYTNISKKWKLYNFNVSVSSPYQFQPNNYYNRKISIENRDVFLSFYIPEFSNLMPLITDIYNLTPQ
YTTIEKLQALYNTPICLNNVHDICTDKLHIFVKMKLNLSQVKKFDIQSKP

Sequences:

>Translated_210_residues
MINQRIIYLKNLICFKIVLYGIIILLCHIYGSYLYTHFEILNTKIQKNKKHLEILQNKYNSAIELLNNSALQKKIKPILQ
QKLSQPYDRNKLIEHYTNISKKWKLYNFNVSVSSPYQFQPNNYYNRKISIENRDVFLSFYIPEFSNLMPLITDIYNLTPQ
YTTIEKLQALYNTPICLNNVHDICTDKLHIFVKMKLNLSQVKKFDIQSKP
>Mature_210_residues
MINQRIIYLKNLICFKIVLYGIIILLCHIYGSYLYTHFEILNTKIQKNKKHLEILQNKYNSAIELLNNSALQKKIKPILQ
QKLSQPYDRNKLIEHYTNISKKWKLYNFNVSVSSPYQFQPNNYYNRKISIENRDVFLSFYIPEFSNLMPLITDIYNLTPQ
YTTIEKLQALYNTPICLNNVHDICTDKLHIFVKMKLNLSQVKKFDIQSKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQRIIYLKNLICFKIVLYGIIILLCHIYGSYLYTHFEILNTKIQKNKKHLEILQNKYN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SAIELLNNSALQKKIKPILQQKLSQPYDRNKLIEHYTNISKKWKLYNFNVSVSSPYQFQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEECC
NNYYNRKISIENRDVFLSFYIPEFSNLMPLITDIYNLTPQYTTIEKLQALYNTPICLNNV
CCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCH
HDICTDKLHIFVKMKLNLSQVKKFDIQSKP
HHHHCCCEEEEEEEECCHHHHHHCCCCCCC
>Mature Secondary Structure
MINQRIIYLKNLICFKIVLYGIIILLCHIYGSYLYTHFEILNTKIQKNKKHLEILQNKYN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SAIELLNNSALQKKIKPILQQKLSQPYDRNKLIEHYTNISKKWKLYNFNVSVSSPYQFQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEECC
NNYYNRKISIENRDVFLSFYIPEFSNLMPLITDIYNLTPQYTTIEKLQALYNTPICLNNV
CCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCH
HDICTDKLHIFVKMKLNLSQVKKFDIQSKP
HHHHCCCEEEEEEEECCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA