Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183878

Identifier: 189183878

GI number: 189183878

Start: 1017748

End: 1019352

Strand: Reverse

Name: 189183878

Synonym: OTT_0971

Alternate gene names: NA

Gene position: 1019352-1017748 (Counterclockwise)

Preceding gene: 189183881

Following gene: 189183877

Centisome position: 50.74

GC content: 24.98

Gene sequence:

>1605_bases
TTGCTACTAAAATTTAAACAATTGATATCTCGCGTTATATTTAAATCCTCTATAATAATATATTTAGGAAAGATTGGAGC
TTCTATTGTAGTAATATCTAACAATAGCATCATTGAAGACATGTTTTTAACATATGATACTGATGGAGTACATAAATTCA
ATAAGTTTCAAGAATTACTTAGCAGATACGCTGGTTATAGTGTATCTATACTAATTGATTTGCCAGAAATAAAGTTACAG
CAAGAATTTTTGATTGCTATAGAAACTGGAATAAAAAAAAATCCAGTTGATAACTATATTAAGCAACATTTTGGCTCAAA
CAGTATAATTGGCTATTATATACTTAATATTACTTATAATGGCAGTGAACTATGGCAAGCACAAATTGCTTCAATAGAAT
TAAATCACATTATCAAAACATTTGTTGATGAAATTATTGTACGTTCAGAAATAACATTTTCTGGATTATTTTTGTGTCCT
TTAGAAATTCCTAAAATTATACATACATTATTAAAGTCAAATATTAAAACTATATGTAATATTATGCAACATATAGCTAA
CTCCACAGTGTTTCAAATAACAAAAACACAATATATATCCCTTCAACAAACTAATTATCTTACTACTAAAACAAAGCTGT
TCAAAAAAGCTTATGAAAATAATATAATTCTGATAGTATGTATTACTAAAGCAAATGGTATTACATTTTGTTTATTCAAT
CAGCAGAATATTATTTTTAGTAACACAATACCATATTGCGCTACTAAAAGCCCTGAGTATATATATGGTATACTAAAGTA
TGAATCTAATGAGATATTATCATCATTTAAGTTATATATTCTAGAATTAAATAAAAAAGTAATAATTCACTACTTAGTTG
ATGAACAAATTCAAAAATTTATAGAAAAGGACTCTAACAGTTACACTGATACTATCATTACAACTATTCCAAATACTTAT
TCTGATCAATTAATATCTCAGTTATTTAATTACTGTTCTATACGCTGTGCTTATAACAAATATCTAGATGAATTCAATAA
GTTAAGAAAATTTAATTCAGTATTTTTACGATTTGTATTGATAGCAGTAATAATATTATTCTCTAGCCTAATTAGAACCT
GGTATAAAGTATTCGTTCAAAAAAAAGCTCTAGCTAATTTTTATGAACAAATTAATACAATTAGTGCAAATCAACATAAA
GCTGAACTTGAGTTAGCAGCTTCTTATAATATATCATCAGATATTATTGAAAGTTATTACCTTGATAAGCACATTAATTC
TAAGCATTATACTATAGCTTTAGATGCATTAAAGTTATTATTGCATGATCCAAATATAGAAATACAGAAAATAACATACA
CACTTAATGAGCAACTACCTAGAAACGAGTTACTCATGTCTATTGAAGTAAAATTCTATTATTTAAATAATACTACTGTA
AACCTAGAAGATTGTTTAATTCAATTAGAAAAATATAATGCTAATATTATCGAGATATTTAAAAATTATGAAGTTAATTT
AACATCTTTAGGACAAGAAATATGTAGCCATTCTAATGTATCAAGAAAATTGCTAACCATGTCTATTAGTAGGATAGTTA
ATTAA

Upstream 100 bases:

>100_bases
TAGGCTAGTTGCTATAAGTTCGAAAAACATAGTATAATGTACAATATATACTGTTCTAATAGCTTATGCTACATTTTTAT
AGTTGCGATTAATGAATATA

Downstream 100 bases:

>100_bases
TATGATAAACCAACGCATTATTTATCTCAAAAACCTAATATGTTTCAAGATAGTGCTATATGGCATAATAATATTATTAT
GCCATATTTATGGTTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEIKLQ
QEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCP
LEIPKIIHTLLKSNIKTICNIMQHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFCLFN
QQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILELNKKVIIHYLVDEQIQKFIEKDSNSYTDTIITTIPNTY
SDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILFSSLIRTWYKVFVQKKALANFYEQINTISANQHK
AELELAASYNISSDIIESYYLDKHINSKHYTIALDALKLLLHDPNIEIQKITYTLNEQLPRNELLMSIEVKFYYLNNTTV
NLEDCLIQLEKYNANIIEIFKNYEVNLTSLGQEICSHSNVSRKLLTMSISRIVN

Sequences:

>Translated_534_residues
MLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEIKLQ
QEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCP
LEIPKIIHTLLKSNIKTICNIMQHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFCLFN
QQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILELNKKVIIHYLVDEQIQKFIEKDSNSYTDTIITTIPNTY
SDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILFSSLIRTWYKVFVQKKALANFYEQINTISANQHK
AELELAASYNISSDIIESYYLDKHINSKHYTIALDALKLLLHDPNIEIQKITYTLNEQLPRNELLMSIEVKFYYLNNTTV
NLEDCLIQLEKYNANIIEIFKNYEVNLTSLGQEICSHSNVSRKLLTMSISRIVN
>Mature_534_residues
MLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELLSRYAGYSVSILIDLPEIKLQ
QEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYNGSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCP
LEIPKIIHTLLKSNIKTICNIMQHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFCLFN
QQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILELNKKVIIHYLVDEQIQKFIEKDSNSYTDTIITTIPNTY
SDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVLIAVIILFSSLIRTWYKVFVQKKALANFYEQINTISANQHK
AELELAASYNISSDIIESYYLDKHINSKHYTIALDALKLLLHDPNIEIQKITYTLNEQLPRNELLMSIEVKFYYLNNTTV
NLEDCLIQLEKYNANIIEIFKNYEVNLTSLGQEICSHSNVSRKLLTMSISRIVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61914; Mature: 61914

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELL
CCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHHEEECCCCCHHHHHHHHHH
SRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYN
HHHCCCEEEEEEECCCCHHCHHHEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEC
GSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKTICN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
IMQHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFCLFN
HHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEC
QQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILELNKKVIIHYLVDEQIQKF
CCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHEEEEEEECCEEEEEHHHHHHHHHH
IEKDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVL
HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IAVIILFSSLIRTWYKVFVQKKALANFYEQINTISANQHKAELELAASYNISSDIIESYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH
LDKHINSKHYTIALDALKLLLHDPNIEIQKITYTLNEQLPRNELLMSIEVKFYYLNNTTV
HHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCEE
NLEDCLIQLEKYNANIIEIFKNYEVNLTSLGQEICSHSNVSRKLLTMSISRIVN
EHHHHHHHHHHCCCHHEEEHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLKFKQLISRVIFKSSIIIYLGKIGASIVVISNNSIIEDMFLTYDTDGVHKFNKFQELL
CCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEHHHEEECCCCCHHHHHHHHHH
SRYAGYSVSILIDLPEIKLQQEFLIAIETGIKKNPVDNYIKQHFGSNSIIGYYILNITYN
HHHCCCEEEEEEECCCCHHCHHHEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEC
GSELWQAQIASIELNHIIKTFVDEIIVRSEITFSGLFLCPLEIPKIIHTLLKSNIKTICN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
IMQHIANSTVFQITKTQYISLQQTNYLTTKTKLFKKAYENNIILIVCITKANGITFCLFN
HHHHHCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEC
QQNIIFSNTIPYCATKSPEYIYGILKYESNEILSSFKLYILELNKKVIIHYLVDEQIQKF
CCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHEEEEEEECCEEEEEHHHHHHHHHH
IEKDSNSYTDTIITTIPNTYSDQLISQLFNYCSIRCAYNKYLDEFNKLRKFNSVFLRFVL
HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IAVIILFSSLIRTWYKVFVQKKALANFYEQINTISANQHKAELELAASYNISSDIIESYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH
LDKHINSKHYTIALDALKLLLHDPNIEIQKITYTLNEQLPRNELLMSIEVKFYYLNNTTV
HHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCEE
NLEDCLIQLEKYNANIIEIFKNYEVNLTSLGQEICSHSNVSRKLLTMSISRIVN
EHHHHHHHHHHCCCHHEEEHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]