Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183832

Identifier: 189183832

GI number: 189183832

Start: 966065

End: 966403

Strand: Reverse

Name: 189183832

Synonym: OTT_0925

Alternate gene names: NA

Gene position: 966403-966065 (Counterclockwise)

Preceding gene: 189183834

Following gene: 189183826

Centisome position: 48.1

GC content: 23.01

Gene sequence:

>339_bases
ATGTCACATCCACTTCAACATTATTGGTATTTAGATTCTATAACAAATTCTATATTCATTAATCTTAAAGTAAAAGCAGG
GGCTAAAATCAATAAAATTATAGGATTATATTATATAAATAACAAAAGCTTTTTATATATTAGCATTAATACAATACCTG
AAAATAATAAAGCTAATCAAGCAATTATAAAATTTCTATCACAATGGCTTGAAGTATGCAGATCAAATATCAAGATAGTT
TATGGCTTGCATAGTAATTTAAAAGTTATATCAGTAATAAATACTAATGCTAACATTTCTAATCTTATTAGAAGTAAATT
AAAAAGTATCCATCTATAG

Upstream 100 bases:

>100_bases
AAAGTGATATTAATTTAAAAAATACGGTAAATATTATATACTGACTTTGCAAAAAACTATAACAAAAGTTAAATAGCTAC
TTTTTAATCATAGACGATAT

Downstream 100 bases:

>100_bases
GTGAATAATATGAAACATTATATTAATTTTACATTTAAAAAAATTGATTAATAATCTCCTTAACCTGCTCTACACTTGTT
ATAGTAGTAACTTTAGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIV
YGLHSNLKVISVINTNANISNLIRSKLKSIHL

Sequences:

>Translated_112_residues
MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIV
YGLHSNLKVISVINTNANISNLIRSKLKSIHL
>Mature_111_residues
SHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIVY
GLHSNLKVISVINTNANISNLIRSKLKSIHL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12858; Mature: 12727

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQ
CCCCCHHEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCHH
AIIKFLSQWLEVCRSNIKIVYGLHSNLKVISVINTNANISNLIRSKLKSIHL
HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQ
CCCCHHEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCHH
AIIKFLSQWLEVCRSNIKIVYGLHSNLKVISVINTNANISNLIRSKLKSIHL
HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA