| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183824
Identifier: 189183824
GI number: 189183824
Start: 959381
End: 960142
Strand: Reverse
Name: 189183824
Synonym: OTT_0917
Alternate gene names: NA
Gene position: 960142-959381 (Counterclockwise)
Preceding gene: 189183825
Following gene: 189183817
Centisome position: 47.79
GC content: 31.76
Gene sequence:
>762_bases TTGAAATTAGTCCATAAAATCTTAGCAAAGAGTCAAGTAAATAATTATATGAATACAAGAATTAAAAAGGTACTATTAGC TGTTACTATGTTATCACTTTATTCATTTCCATCGGTAGCATCAGATATAGAATGTTATGGTAGAAATTATTATTTAAAAA TATCTATGGGAATAACTAAGCCTACAGGGCAGTTTAGTATCGAGAATTCTAAAAATATCTTAGACAATGATTGGAGTACT AATCTTCAAATGATAAATGATGCTATTACTAATAGAAGTAGTACAATTTATGGAATGTCTCTTGGTATGCATTGTACTCA ATCAATAAGATTAGAACTAGGAGGGCAGTATATAAAGAATCTTCAATTTGGAGGTGATATTGAGGCAGTAGATCAAAACA TTAAAGTTAGTAATCATAAGATAGGTTCTGATATAGAAGGCGGTATCTCTGGTATTGCCGGAATGATTAAGGTGTACTGG AATATAATTAGTGTATTTGATATAGTATCTGCTTTCGCTACTGGAGGTTTGAGTATGTATGGTCTTAATATGTCACATGA GCCAATGTCGGTTTTTCCTGGTTTTTTAGTTGGAGGAGGTGTATCACTTAATATAAGCCGTATACATTTTGGTCTTGAGT GTAATTATACAAGCTTGAGCGTAAAAGAGAATTTAAAGATTAACTCGCAATCATTAGGTCAGCTGAAGTTGAATAATTTG TATGGCTATAACATATTAGGCAGTGTATGGGTTGATTTCTAG
Upstream 100 bases:
>100_bases ATTATTTATGGTGTTTTAAAGCATAATTCTCCTTTTAGTGCCAATGATTAAATCAAATTTTGATTGTTATTTTATTAAGT TAAATGTACAATAAGGTTCT
Downstream 100 bases:
>100_bases GTTTTTGTTTATAAAAATTTGTAAATTTAGGAATTTTAAAAAGCATCAAAACCATATGCTTATTGTGCTGATGGTTTCTA TTCTTTGATGTATTAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL YGYNILGSVWVDF
Sequences:
>Translated_253_residues MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL YGYNILGSVWVDF >Mature_253_residues MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL YGYNILGSVWVDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27924; Mature: 27924
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCC PTGQFSIENSKNILDNDWSTNLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKN CCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCHHHHHC LQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYWNIISVFDIVSAFATGGLSMY CCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL ECCCCCCCHHHCCCCEECCCEEEEEEEEEEEEEECCEEEEECCCCEECCCCCCEEEECCC YGYNILGSVWVDF CCCCCCEEEEECC >Mature Secondary Structure MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCC PTGQFSIENSKNILDNDWSTNLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKN CCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCHHHHHC LQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYWNIISVFDIVSAFATGGLSMY CCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL ECCCCCCCHHHCCCCEECCCEEEEEEEEEEEEEECCEEEEECCCCEECCCCCCEEEECCC YGYNILGSVWVDF CCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA