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The map label for this gene is oxaA [H]

Identifier: 189183736

GI number: 189183736

Start: 872575

End: 874278

Strand: Direct

Name: oxaA [H]

Synonym: OTT_0829

Alternate gene names: 189183736

Gene position: 872575-874278 (Clockwise)

Preceding gene: 189183734

Following gene: 189183737

Centisome position: 43.43

GC content: 29.81

Gene sequence:

>1704_bases
ATGGATAGTGATAATAGGCTAAATCTTATTTTAGCAATAACTTTGTCATTGGCAATTATTTTAGGGTGGCACTTCTTTTA
TGAAAAACCACGCTTAATAAAAATGTCTAATGCCCAGAAAGAAAAAATAGAGTATAACAAGCGTTCTAGTACTAATAAAC
ATTTACTACATGAATCTGCATTAAAAATTAAGGATAAAGTAGATATAATTGACTATAGTACTAGAGTAAAAATTATGACA
AATAAGCTGCACGGCTCAATTTCATTAAAAGGATTAAGATTTGATGACTTGATACTTGTAGGTTATAAACAAGATGTTCT
AGAAAATAGTCCTGATGTTGAACTATTATCTCCTTCAGAAACAGCAACAGCTTACTTTGCTGAAGTTGGCTGGTACTGTG
CTAAAAATGCAGATTCTGATTTTCCAAATAGCGATACATTATGGCAAACTGATAAATCTATACTACAAGCTAATGATACA
ACAACTTTTACCTGGACTAATAAGCATAATGTACAGTTTATAGTTAGTGTATCAATAGATGACAATTATATGTTTACAAT
TAACCAATCGATTGTTAATAACAGCAAGCAACAACTCGCTGTTCAATTTCATGGTCTAATACATCGCAATTTAGCAGAAA
ATGAAAATTCTGCTAATATTTTTCAAGGGCCTATAGCATCTATTGATAGTTACTTAAATGAGGTAACTTACAATAAATTA
AAGGAAAAAAAACATATTGATTATAATCTTAATGTTGTTCATTGGCTAGGTATAAGTGATAAATATTGGCTAACATCTTT
TATTCCTGACGTTAAATATCGTTATTCTACAAGTTTTATGTATGGTAAAGCTGGATTTGAAAAATACCAAGTTAGTTTCT
TATCTCCTAAAGAAGTAGTAAATTCTGATGGTGGAAGTTTATCTGTTGTACATCATCTATTTCTTGGAGCCAAGGAAGTA
AAATTACTAGACTATTACGCTAAAAAATACAATATTAAGCTATTTGACAGAGCAATTGATTTTGGTTGGTTCTATATTCT
TACTAAGCCTCTTTTTTATACTTTGAGTTTTTTCTATAAATACTGTGGTAATTTTGGTGTAAGTATTTTAATTGTTACTA
TATTAATAAAAATAATGATGTTTAGTTTTTCTAATCGATCTTATTCTTCAATGAAAAAGATGCGCGACTTACAGCCTAGA
ATTCAACGTCTTCAAGAACTATATGGAGATGATAAAATTAAACTTCACCAAGAAATAATGGCTCTATATAAGAAAGAAAA
AGTAAGTCTTGCTGGAAGCTTTCTGCAGTCATTAATTCAACTTCCTATTTTCTTTTCGCTATATAAGGTTTTACATGTAA
CTATAGAAATGAGGCATGCCCCTTTCTTTATTTGGATCAAAGATCTGTCAGCTCTTGATCCAACTTGTATATTTAACTTA
TTTGGGTTACTACCTTTCCATGTGCCATGGTTTTTAAATATTGGCGCTTGGCCAATTTTAACATCTGCAACAATGATGCT
ACAGCAAAAAATAAATCCAGCTCCTGCTGCTGATCCTGCTCAAGCTCAAGTATTAAAGTTTATGCCATTAATTCTTTTAA
TAGTGTTTAATAATTTTCCAGCTGGGTTGCTAATTTATTGGACATGGAATAATATATTATCCATTGTACAACAATTTATT
ATTAATAAGATTAATAATAAATGA

Upstream 100 bases:

>100_bases
TTGTCAATAGAGCATAGTAGTAGGACAATTTTTATTGCTTATTTTGTATAAATCCTATAGAAACAAAGTTAACGGAATCA
TAAAAATTAAAATTTAAGTA

Downstream 100 bases:

>100_bases
AAGAAGTTATATGTAAGAACTCAACAAATAAGTTAAAGCTTTTTCTTGATGCTAAGTTTTTGCTTGGAGCAAGCCATAAA
AGTCAGTTCCCAGCTACAAA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESALKIKDKVDIIDYSTRVKIMT
NKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDT
TTFTWTNKHNVQFIVSVSIDDNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSYLNEVTYNKL
KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVVNSDGGSLSVVHHLFLGAKEV
KLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPR
IQRLQELYGDDKIKLHQEIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNL
FGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFPAGLLIYWTWNNILSIVQQFI
INKINNK

Sequences:

>Translated_567_residues
MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESALKIKDKVDIIDYSTRVKIMT
NKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDT
TTFTWTNKHNVQFIVSVSIDDNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSYLNEVTYNKL
KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVVNSDGGSLSVVHHLFLGAKEV
KLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPR
IQRLQELYGDDKIKLHQEIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNL
FGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFPAGLLIYWTWNNILSIVQQFI
INKINNK
>Mature_567_residues
MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESALKIKDKVDIIDYSTRVKIMT
NKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSETATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDT
TTFTWTNKHNVQFIVSVSIDDNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSYLNEVTYNKL
KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVVNSDGGSLSVVHHLFLGAKEV
KLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYKYCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPR
IQRLQELYGDDKIKLHQEIMALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNL
FGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFPAGLLIYWTWNNILSIVQQFI
INKINNK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=507, Percent_Identity=27.6134122287968, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 65597; Mature: 65597

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESA
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHH
LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE
HHHCCCEEEEECCCEEEEEEEECCCEEEEECEEECCEEEEECHHHHHCCCCCCEEECCCC
TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID
HHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCEEEEEEEEEC
DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSYLNEVTYNKL
CCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVV
HHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEECEEEECCCCCCEEEEEECCHHHHH
NSDGGSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYK
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
YCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIKLHQEIM
HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHH
FGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFP
HHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AGLLIYWTWNNILSIVQQFIINKINNK
CCEEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSDNRLNLILAITLSLAIILGWHFFYEKPRLIKMSNAQKEKIEYNKRSSTNKHLLHESA
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHH
LKIKDKVDIIDYSTRVKIMTNKLHGSISLKGLRFDDLILVGYKQDVLENSPDVELLSPSE
HHHCCCEEEEECCCEEEEEEEECCCEEEEECEEECCEEEEECHHHHHCCCCCCEEECCCC
TATAYFAEVGWYCAKNADSDFPNSDTLWQTDKSILQANDTTTFTWTNKHNVQFIVSVSID
HHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCEEEEEEEEEC
DNYMFTINQSIVNNSKQQLAVQFHGLIHRNLAENENSANIFQGPIASIDSYLNEVTYNKL
CCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KEKKHIDYNLNVVHWLGISDKYWLTSFIPDVKYRYSTSFMYGKAGFEKYQVSFLSPKEVV
HHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEECEEEECCCCCCEEEEEECCHHHHH
NSDGGSLSVVHHLFLGAKEVKLLDYYAKKYNIKLFDRAIDFGWFYILTKPLFYTLSFFYK
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
YCGNFGVSILIVTILIKIMMFSFSNRSYSSMKKMRDLQPRIQRLQELYGDDKIKLHQEIM
HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALYKKEKVSLAGSFLQSLIQLPIFFSLYKVLHVTIEMRHAPFFIWIKDLSALDPTCIFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCHHHHHHH
FGLLPFHVPWFLNIGAWPILTSATMMLQQKINPAPAADPAQAQVLKFMPLILLIVFNNFP
HHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AGLLIYWTWNNILSIVQQFIINKINNK
CCEEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA