| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is engB [H]
Identifier: 189183737
GI number: 189183737
Start: 874275
End: 874898
Strand: Direct
Name: engB [H]
Synonym: OTT_0830
Alternate gene names: 189183737
Gene position: 874275-874898 (Clockwise)
Preceding gene: 189183736
Following gene: 189183738
Centisome position: 43.52
GC content: 28.21
Gene sequence:
>624_bases ATGAAAGAAGTTATATGTAAGAACTCAACAAATAAGTTAAAGCTTTTTCTTGATGCTAAGTTTTTGCTTGGAGCAAGCCA TAAAAGTCAGTTCCCAGCTACAAATTTACCAGAGTTTGTATTTGTTGGTAAGTCAAATGTAGGCAAGTCTTCCTTAATTA ATTTATTATGTAATAAGCATAGTCTTGCCAGGGTTTCTAAAACTCCTGGACGAACTAGGGAAATAAACTTTTTTCTAATA GCAAACAAATTAATTCTAGTAGATTTGCCAGGTTACGGCTATTCTAAAACTGCAGTAGTAACATGTAAAAATTGGGAAAA ATTAATTTTAAGCTACTTAGAGAATAGAAAAAATCTGAGATTAATATATGTATTAATTGATGCTAGACGAGGTATAAAGG ATAATGATCTTGCTGTAATAAATTTAGTACATCACTTTAATTATACCATGAAAATTGTTTTCACTAAGGAAGATAAGATT TCAGATTTAGAAAAAAATAGTTTAATAGCTACAAGCAAAAATTTGCTTGATTATAATGATAAAATAATATTTACAAGTAT TAGGAATAAGAATGGTGCGCAGGAAATTCAGTATAATATACTCAAATACTCAAAAAGAACTTAA
Upstream 100 bases:
>100_bases TAGTGTTTAATAATTTTCCAGCTGGGTTGCTAATTTATTGGACATGGAATAATATATTATCCATTGTACAACAATTTATT ATTAATAAGATTAATAATAA
Downstream 100 bases:
>100_bases TATTAGTACTAATAATTTACAAAGTAGTAATTGTAATTTAAATCCTAAAGCAATAAAACTTTTGCTAGCTCAAAGCGTTG ATCTAAAAGGAGAAACTGTA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKEVICKNSTNKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLI ANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIYVLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKI SDLEKNSLIATSKNLLDYNDKIIFTSIRNKNGAQEIQYNILKYSKRT
Sequences:
>Translated_207_residues MKEVICKNSTNKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLI ANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIYVLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKI SDLEKNSLIATSKNLLDYNDKIIFTSIRNKNGAQEIQYNILKYSKRT >Mature_207_residues MKEVICKNSTNKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLI ANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIYVLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKI SDLEKNSLIATSKNLLDYNDKIIFTSIRNKNGAQEIQYNILKYSKRT
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=135, Percent_Identity=39.2592592592593, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI145693205, Length=175, Percent_Identity=37.1428571428571, Blast_Score=120, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6320543, Length=177, Percent_Identity=33.8983050847458, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 23703; Mature: 23703
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVICKNSTNKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKH CCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCC SLARVSKTPGRTREINFFLIANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLR HHHHHHCCCCCCEEEEEEEEECEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCEE LIYVLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLLDYND EEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCC KIIFTSIRNKNGAQEIQYNILKYSKRT EEEEEEECCCCCHHHHHHHEEEECCCC >Mature Secondary Structure MKEVICKNSTNKLKLFLDAKFLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKH CCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCC SLARVSKTPGRTREINFFLIANKLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLR HHHHHHCCCCCCEEEEEEEEECEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCEE LIYVLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLLDYND EEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCC KIIFTSIRNKNGAQEIQYNILKYSKRT EEEEEEECCCCCHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]