| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is mutL [H]
Identifier: 189183683
GI number: 189183683
Start: 815544
End: 817586
Strand: Direct
Name: mutL [H]
Synonym: OTT_0776
Alternate gene names: 189183683
Gene position: 815544-817586 (Clockwise)
Preceding gene: 189183682
Following gene: 189183684
Centisome position: 40.59
GC content: 30.79
Gene sequence:
>2043_bases ATGGGTGTAATAAAATATTTGTCTGATACTACTATAAACCGTATAGCTGCTGGAGAGGTAGTAGAGCGTCCTGCTTCTGT TGTTAAAGAACTAGTTGAGAATTCAATTGACTCAGGAGCAATGAAAGTTGATATTACACTGGAAAAATCTGGCAAGAATT TAATTATAGTTTCAGATAATGGCTGCGGTATGTCTGCAGAAGATTTAGAAACTGCAATTGAACGTCATACTACTTCGAAG TTAAATGAAAATGATATTATGAATATTAATACTTTTGGATTTCGAGGTGAAGCTTTGCCTTCAATTGCTTCTGTTAGTAG AATGCGCATTGTAACTAAATCTAAACTTCATGATCAAGCTTATGAAATTAATGTTCATGGTGGTGTTAAAACTAAAATAA ATTCGTTACCTCAATTGCAGCTAACAGGAACTAAAATAGAAGTAAGAGACCTTTTTTTTGCTACTCCAGCTAGATTAAAA TTTTTACGGTCTGATCGTACTGAATATATAGTGTGTTATGATGTAGTAAAAAGATTAGCAATTTCTTATCCTCATATTGC ATTTTCATTAGTACATGATGATAAGACTATTTTAAAACTTAAAGCAAGTTCTCAATTATCTTTTGATGATGCTAGAAAAT CTAGAATATCTGAGATATTATCAAAAAATTTTATTGATAATGCAATATCAATAGGCATAGAAAGAGATGAATTATCTATT ACTGGCTTTGTTAGTGTTCCAACATATAATAAGGCTTCAGCTGAAGATCAATTATTATTTGTTAATAATCGTCCAGTAAA AGATAAGCTGTTAATGACAGCAATCAGATTAGCATATCAAGGAGTATTAGCTCGTGAAAGATATCCAGTAGTTGTAATTT TTATTAGCGTTGCTCCTCATTTTGTTGATGTTAATGTTCATCCTACTAAAAGTGAAGTGAGGTTTCATGACTCTAGTTTA GTTAGAGGCATTATAATTAGTGCTATTAAACAAGCATTATTGAATACATCTCAGTTGGTTTCATCGATAGCTGCAAGTGA TGCAAATAAATATATGAAACCTCAATATGATACTGATATATCTGAAAAACTAGAATTAAGTAAAGATATAAAAAATATTC AGCAGTTTCCATTACAAGAACTAGTAAATAATTTTAGCAAGGATTTTAATGTAAATTTGAAATCTGAATTTCAAGATATT CAAGCAAACAATTTAGTCAGTGATAACGAGCAGCAGAAAATAGAGTCAACAACAGAGAATATAAAATCTTTTTCTGCATT TAATCAATTAGGTGGTAATACAGAGTCAAATCAGCATATGAGTATTTTGGATGATGATAAGACCAAAGATGATATAATTG CTCGTAACATAGCTACTAATGAGAAAGTAGATGTTAATAAGCAGGAAAATATACAGAAATTAAATGATAGTTTCTGTAAT AATTTTGGAGATAGTTATCAACTGCCTTTAGGATTAGCTTGTGCTCAATTTCATGGTAATTATATTCTTGCTCAAACTGT AGATAGCTTAATAATTGTAGATCAGCATGCAGCTCATGAAAGGATAACTTATGAGAATTTACGTTCTCAATTTCAGGCAG GACAAATTATCAGACAGCGATTGTTGATGCCGCAAGTTGTTATTTTGCCTGATATTGTTAGAGTAGAAAAATTATGTGAT AAAATGCAAGAAATTCTAGCATTAGGTATGGGGTTTGAACGTTGTGGTGATGTACAAGTAAAAGTTTTTGAAATGCCAGC AATATTGCAATCTGTTGATATTGAAGCAGTTGTGAATGATGTTGCTGATTATTTACTTACTACTGATGATCATATATTAT TAGCTGATATGGTGGAAAAAATATTACAATCTTATTCATGTTATCATTCTATAAGATCAGGTAGAATATTAACTATTGCA GAGATGAATAGTTTATTACGTCAAATTGAAACAACTCCATTTTCTGGACAATGTAATCATGGTCGCCCAACTTATGTTAG ATTTGAGCTAAAAGATATAGAGAAGCTATTTGGCAGGAGATGA
Upstream 100 bases:
>100_bases AATCGTTATTATGATTACAGTAATTTATTTGCTTGATTATTGTAGCAAAAATCAGCAAAATCTAAGTTTCTAATCTAAAT ATGTGATGTGGTAAAGTTGT
Downstream 100 bases:
>100_bases TTTTTTTCAGTCTACTACTTTATTTTCCTTATATCAAACGCATGGTAGAAAGCAGTACATATAATCAATTCTTTTCTTGC CAATTCTAAGTTAAATCAGT
Product: DNA mismatch repair protein MutL1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 680; Mature: 679
Protein sequence:
>680_residues MGVIKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDNGCGMSAEDLETAIERHTTSK LNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQAYEINVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLK FLRSDRTEYIVCYDVVKRLAISYPHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSI TGFVSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPHFVDVNVHPTKSEVRFHDSSL VRGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDISEKLELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDI QANNLVSDNEQQKIESTTENIKSFSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCN NFGDSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQRLLMPQVVILPDIVRVEKLCD KMQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVNDVADYLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIA EMNSLLRQIETTPFSGQCNHGRPTYVRFELKDIEKLFGRR
Sequences:
>Translated_680_residues MGVIKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDNGCGMSAEDLETAIERHTTSK LNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQAYEINVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLK FLRSDRTEYIVCYDVVKRLAISYPHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSI TGFVSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPHFVDVNVHPTKSEVRFHDSSL VRGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDISEKLELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDI QANNLVSDNEQQKIESTTENIKSFSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCN NFGDSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQRLLMPQVVILPDIVRVEKLCD KMQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVNDVADYLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIA EMNSLLRQIETTPFSGQCNHGRPTYVRFELKDIEKLFGRR >Mature_679_residues GVIKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDNGCGMSAEDLETAIERHTTSKL NENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQAYEINVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLKF LRSDRTEYIVCYDVVKRLAISYPHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSIT GFVSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPHFVDVNVHPTKSEVRFHDSSLV RGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDISEKLELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDIQ ANNLVSDNEQQKIESTTENIKSFSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCNN FGDSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQRLLMPQVVILPDIVRVEKLCDK MQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVNDVADYLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIAE MNSLLRQIETTPFSGQCNHGRPTYVRFELKDIEKLFGRR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=327, Percent_Identity=36.085626911315, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI310128478, Length=359, Percent_Identity=28.9693593314763, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI4505913, Length=415, Percent_Identity=27.9518072289157, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI4505911, Length=335, Percent_Identity=29.2537313432836, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI189458898, Length=335, Percent_Identity=29.2537313432836, Blast_Score=122, Evalue=2e-27, Organism=Homo sapiens, GI189458896, Length=321, Percent_Identity=29.595015576324, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI263191589, Length=231, Percent_Identity=31.6017316017316, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310128480, Length=315, Percent_Identity=27.3015873015873, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI91992162, Length=270, Percent_Identity=28.5185185185185, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI91992160, Length=270, Percent_Identity=28.5185185185185, Blast_Score=79, Evalue=2e-14, Organism=Escherichia coli, GI1790612, Length=328, Percent_Identity=39.6341463414634, Blast_Score=249, Evalue=4e-67, Organism=Caenorhabditis elegans, GI71991825, Length=328, Percent_Identity=32.6219512195122, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17562796, Length=362, Percent_Identity=28.7292817679558, Blast_Score=128, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=448, Percent_Identity=33.7053571428571, Blast_Score=184, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=362, Percent_Identity=25.414364640884, Blast_Score=110, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6325093, Length=215, Percent_Identity=26.9767441860465, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17136968, Length=364, Percent_Identity=33.2417582417582, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI17136970, Length=353, Percent_Identity=28.8951841359773, Blast_Score=109, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 76462; Mature: 76331
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDN CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC GCGMSAEDLETAIERHTTSKLNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQA CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE YEINVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLKFLRSDRTEYIVCYDVVKRLA EEEEECCCCHHHHCCCCCEEEECCEEEEHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHH ISYPHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSI HCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEE TGFVSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPH EEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCE FVDVNVHPTKSEVRFHDSSLVRGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDI EEEEEECCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCH SEKLELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDIQANNLVSDNEQQKIESTTEN HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKSFSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCN HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH NFGDSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQR CCCCCCCCCHHHHHHHHCCCEEEEEHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LLMPQVVILPDIVRVEKLCDKMQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVND HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHH VADYLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIAEMNSLLRQIETTPFSGQCNH HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCC GRPTYVRFELKDIEKLFGRR CCCCEEEEEHHHHHHHHCCC >Mature Secondary Structure GVIKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDN CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECC GCGMSAEDLETAIERHTTSKLNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQA CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE YEINVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLKFLRSDRTEYIVCYDVVKRLA EEEEECCCCHHHHCCCCCEEEECCEEEEHHHHHCCHHHHHHHHCCCCCEEEHHHHHHHHH ISYPHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSI HCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCEEE TGFVSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPH EEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCE FVDVNVHPTKSEVRFHDSSLVRGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDI EEEEEECCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCH SEKLELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDIQANNLVSDNEQQKIESTTEN HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKSFSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCN HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH NFGDSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQR CCCCCCCCCHHHHHHHHCCCEEEEEHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH LLMPQVVILPDIVRVEKLCDKMQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVND HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHH VADYLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIAEMNSLLRQIETTPFSGQCNH HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCC GRPTYVRFELKDIEKLFGRR CCCCEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA