Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183670

Identifier: 189183670

GI number: 189183670

Start: 788811

End: 790436

Strand: Direct

Name: 189183670

Synonym: OTT_0763

Alternate gene names: NA

Gene position: 788811-790436 (Clockwise)

Preceding gene: 189183667

Following gene: 189183672

Centisome position: 39.26

GC content: 29.34

Gene sequence:

>1626_bases
ATGATATGTTATTCGAATCGTACGATCAATCTAAATGTATTAGCAGACACATTAACCGTATTAACTTCAAATATTGAGAT
ATTAAAATACTTATATACTTTAGACATACCTTTTTCTGCTATTTCCACTAAGTTATTTCGTATAGGAGAAGTTAATGCAC
AAAAGATTTTGAAATGGAGATTGGGAGTTTCTGAGCTAACGCTTGAAAATCTTTCAGGAAACACATATGAAGAAATATGT
GAAAAAAGAGCGGATGTTTTGAATTTTCTGAAAACAGCAAGATCAGAGTATTATGCGATTAACAGTGCTAATGATGATGT
TGATAATAATATTACGAATCAGACAATGATAAAACAAAATACATTTGACCTATACATTACTAACAACAATAAATTAGAAA
ATCATTCATGGTCTATGAAACTTTTTTTAAGCAAAATTCTTCAAAAAAATCAGCAAAGTAATTACTCAAATAAAGATTTT
GATGGATTCATTTCTAAGCTAGACTTAGATAATTTAGAAAAACTACTACAACCAGCTAGAATAATAGAAGCTGCAAGTAT
CACAAGTATGATATGTTATTCGAATCGTACGATCAATCTAGATGTATTAGCAGACACATTAACCGTATTAACTTCAAATA
TTGAGATATTAAAATACTTATACACCCTAGACATACCTTTTTCTGCTATTTCCGGTAAGTTAGGTCATATAGAATTTAGT
GCTAAAGATTGTTTGGAGAAACTATTTAAAATTCTTGAGATAAAAAGAGAATCGCAGAAAAATGTCAAAGATTTTGTAAG
CTACTTCAAAATACTTGAACAGAAATTAGATATTGTGAAAAATAAGGATCTAGAAACTCGTAAAAACGTCATAGATAGCA
TGCTCAAAGAATATAGCAATATTCAAGAGACAAATAATGATAATGATGAAAAAATAAGCGAAACAGTATCTGAATTAACA
AATAACTTAACAATCAATAATATTCAATCTCAGATAATAGATAAACACAGAGAAGATGATATTGAAACCAATAGTGATGA
GATAAATATGCATAGTAATAGTCAAGAATTAGCTAACATATCAGATTCTGTGCTAGTAGCTACAGAAGAAGTGCAATATT
GTTATGAAGAATCTGTATCTACAAAGAATGAGATATACCTAGAAGATGGTGATTTTGCAAAGAATAGTAATGAGATAAAT
ACGAGTGATCCAGAATTAAATGATATATTAGAGCTTTCGCTAGCTATAGAGGATGTAAAAAATAATGTAGTATTCGAAGC
AGTAAATAACTCAACTGTTAACAATCAATCTCAACCGATAGAAAGATATCAAGAAAATAATATTGAAAATCTGCAAATAA
TAAGACAGATGCATACTGAAGAAGTTATGCCATCAGTAGAAAAGCGAAAATTATGTTATGATAAGCATGAAGATCTTTAT
ACTCATAAACGTAAGTGTAATAATCATGAGGTAAATAACGGTAATATCACAGAACTAGCACTAAATGAACAAGAAAATAG
CATTAATGTAGATTGTCCTACTTCTGTCTCCATTAGTCATCTAGCAGGAGAATCGACTTACATCCTTAGTGATACAGCAG
GGTATTCTGCTTACATCTTGGAATAA

Upstream 100 bases:

>100_bases
CCTACGTTCATGCTATAAATTCATTTCTAAGCTAGACTTAGATAATTTAGAAAAACTACTACAACCAGCTAGAATAATAC
AAGCTTCCAATATCACATGT

Downstream 100 bases:

>100_bases
GTATCAAAAGAGATATCAGATCAAGTAAGAATTAATAATCCCCTTTGATTATTATTTGGTATTAATCTCTTTTTTTTCCA
CTCTTGATATATCTTGCAAA

Product: repeat-containing protein D

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC
EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF
DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS
AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT
NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN
TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY
THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE

Sequences:

>Translated_541_residues
MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC
EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF
DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS
AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT
NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN
TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY
THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE
>Mature_541_residues
MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC
EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF
DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS
AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT
NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN
TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY
THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62001; Mature: 62001

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWR
CEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
LGVSELTLENLSGNTYEEICEKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQN
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECC
TFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDFDGFISKLDLDNLEKLLQPAR
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
IIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS
HHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEC
AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IQETNNDNDEKISETVSELTNNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANI
HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCC
SDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEINTSDPELNDILELSLAIEDVK
CCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY
CCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYIL
HHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEE
E
C
>Mature Secondary Structure
MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWR
CEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
LGVSELTLENLSGNTYEEICEKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQN
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECC
TFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDFDGFISKLDLDNLEKLLQPAR
CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
IIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS
HHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEC
AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IQETNNDNDEKISETVSELTNNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANI
HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCC
SDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEINTSDPELNDILELSLAIEDVK
CCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY
CCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYIL
HHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEE
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA