Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is kefB [H]

Identifier: 189183588

GI number: 189183588

Start: 709750

End: 711492

Strand: Reverse

Name: kefB [H]

Synonym: OTT_0681

Alternate gene names: 189183588

Gene position: 711492-709750 (Counterclockwise)

Preceding gene: 189183591

Following gene: 189183587

Centisome position: 35.42

GC content: 32.87

Gene sequence:

>1743_bases
ATGGAATCTTATGACTTTTTACCAAATATCGTTATACTACTTGCTACTGCAATTTGTATTGTAATAGTTTTTAAAAAACT
AAAGCTTAGTCCTGTACTTGGATATTTGGTAGCTGGAGCTCTAATTGGTGATCATGGCCTTAAAATTGTCAACGTTCAAT
ATACTAGTGCTATTGCTGAATTTGGAGTAGTTTTTTTATTATTTGCGATTGGGTTAGAATTATCAATTGAAAGATTAAAA
GCCATGAGAAGGTACGTCTTTGGCTTAGGATCGTTACAAGTGATCATCACTAGTGTAATAATCGGTGGTTGTGTCATGTC
ATATTATGATAATGTTGATGTATCAATTATTATTGGAACAGTGTTAGCTCTGTCTTCTACCGCTATCGTTCTTCAGGTAA
TTGAAGAAAGTCGTAGCCAGTCCAGTCAAGTTGGTAGAGTTGCATTATCAGTATTACTGATGCAAGATTTTGCTGTAGTA
CCATTACTTGTAATACTACCAATGCTATCTAATAAAACAGACATATCTATTGCTCAAGCTATGGGTATTGCTCTGGTTAA
GGCTATGATAGCACTAATAGTCATATTTATTACTGGTCAACTATTCTTAAGACCTTTATTCAAAGTAATTTCTATTGATA
AACCACCTGGAAGTACAAATGAATTATTCATAGCTACAACTCTACTGATTGTACTATCTGCTGCTTGGGGAACAAGTCAT
CAAGGTTTATCACTTGCACTAGGTGCATTTGTTTCAGGTATATTAGTGGCTGAAACTGAATTTAGATTACAAGCAGAAGA
AAGCATATATCCATTTAAGGGGTTATTACTTGGCTTATTCTTCATGTCTGTAGGAATGCATATCAATGTTAATGAAATTA
TTCAAAATCTGCAAACAATCTTGGTTTGCTCAATAGGATTGATTTTAATTAAGGCAACTATTGTTACTGGCTTGTGTATT
CTATTTAACTTTAATAAGAGTATTGCATTACATACAGGATTACTGCTATCTCAAGGTAGTGAGTTTGCTTTTATTTTGTT
TAATGAAGCAATGAAGGAGGGAATTATTGAAAACTCAATTGGTAAAACTTTATTATTAGTTGTAACTTGTACTATGGCTT
TAACTCCATTATTATCTGTAGCGGGAGCAAAAATTGCTGACCTGCTTGGCAATGGTAAAAAGGAGGAGTATAATCCACTT
CAAATTATTGAACAAGGAGCTAGAGATTTAACTAATCATATTATTATAGCAGGATTTGGCCGTGTAGGTAGAATGGTAGC
AAATGTTCTAGAAGCAGAAAATATACGTTATATTGCAATTGATATTAATGAACAAGCTGTAAAAGAAGATAATCATAGTA
GTTTTCCTATTGTTCAGGGAGATATTTCTCAAGTTGACACATTAAAAGCGCTAGGAATAGAGCGTGCATCAGCAGTTATT
TTGTCTTTAAGTAATGAAATTACCATCAAAAAAACTCTAAAAGCTATATCAAATAATTTTTCACATATTGCTATAATTGT
AAAAGCAAAAGATTTGCAGCGCTCTAATGAATTCTATGAATGTGGAGCAACAGTTATTGTTCCATCAGATTATGAGGTTG
GATTACAATTAGGTAGCGAAGTCTTAAAAGTAATAGGCATTAGCGATTACGAAGTTAATAGAATTAAAAACCAATTTCGT
TCAGGTAATTACGTAGCTACAAAGCAAAGCCAAACCCTAGATAATGATGATGAAAACGAGTAG

Upstream 100 bases:

>100_bases
TAAGTATAATGTATAATAGTTTATTGCCATAGAATGTAAAGTAACTCCAGATATATATTACGTTCTTAAAATCTAACTAA
TTAAGTTTTAGAAGAGCAGA

Downstream 100 bases:

>100_bases
AATTTACAGCTTTATTATAACAGTTATAATTATGGTTACTGTATTTATCAATGCTGCGTTATCAGATAACAAAAATACTA
AAATTCCAAGGTTTGTTTCA

Product: glutathione-regulated potassium-efflux system protein KefB

Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]

Alternate protein names: K(+)/H(+) antiporter [H]

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK
AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV
PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH
QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI
LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL
QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI
LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR
SGNYVATKQSQTLDNDDENE

Sequences:

>Translated_580_residues
MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK
AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV
PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH
QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI
LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL
QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI
LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR
SGNYVATKQSQTLDNDDENE
>Mature_580_residues
MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK
AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV
PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH
QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI
LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL
QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI
LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR
SGNYVATKQSQTLDNDDENE

Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=383, Percent_Identity=24.8041775456919, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1786232, Length=578, Percent_Identity=31.8339100346021, Blast_Score=288, Evalue=1e-78,
Organism=Escherichia coli, GI1789749, Length=561, Percent_Identity=33.1550802139037, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1786685, Length=522, Percent_Identity=26.2452107279693, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 62839; Mature: 62839

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA