Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183411

Identifier: 189183411

GI number: 189183411

Start: 522050

End: 522880

Strand: Reverse

Name: 189183411

Synonym: OTT_0504

Alternate gene names: NA

Gene position: 522880-522050 (Counterclockwise)

Preceding gene: 189183418

Following gene: 189183410

Centisome position: 26.03

GC content: 27.92

Gene sequence:

>831_bases
ATGAAATACTTACACAGAAATTTCTATATATTAGCTGCAATCTGTTTAATGGCTATATATCATGTATTTAGCAAGTCTGA
CAATTTAGTAGAACGTAGTATAAGTTCTACTAATGATATTAATCAGCATGATAACTCTCAACAAATAAGCAGTAATGATG
TCCAACTGGCTACCACTTCTGAAGATCAAGACAACAATATTAATGAAGATAATAATATTTCTACTAATAATTCGAAAGAA
ACCATAAATTCAGTATTAAAAATCAATAAGTATGATATTGTACTAGGAAATAAAGACTCTAATATTAAGATTTTTGAATA
TTTTTCATATGCTTGTTATCATTGTGCTCGCTACCATGAAAAGATTTTTCCTACACTTAAGCATAAATTTATAGATACCA
ATAAAATAGCTTACATTACACGTGAGTTTATAACTGCAAAACAAGATTTAGATGGAGCAATGCTATCTAGATGCGGTGGT
ACATTAATGTGGAATAAGTTTCATACTACATTATTAGAGCAGCAAGATAAATGGGTGTTTAACAAAAATTACATGAATTG
GCTGAAGGATATAGGAAAAATTGGAGGTATTACCACAGATCAGTTTCTTAATTGTTTTAAAGATGAAATATTAGCTCAGC
AGCTAATGCTTAATACTGTAAATATTAGTAAGTTTGAAATATTTGATGGAACTCCATGTATTATTGCTGTTATTAATGAT
GAACATATAATTAGAATAGAAAACGTGATTACAGAAATTTCAGACATAGTTGAAAAAGCAGATAATTCTAAAGATAAGAA
AAATGATATTACAGAAGCTCAAGAAAAGTAA

Upstream 100 bases:

>100_bases
AAGTAGTATATAGTTTTTTAGAGATATGAAGTATGAATGGTAAACTGTAATAGATTACAAGAATCACTATATCTAACTCA
TATAAATATAAATACTAAAT

Downstream 100 bases:

>100_bases
AAATATGCTCGTATTTACTCATTAGCATTTGGTTTTTTAAAAAATAATAGTTTAAAAATATAGTAGTAAATAGAAAGATA
GTTCTTTTAATATTTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKYLHRNFYILAAICLMAIYHVFSKSDNLVERSISSTNDINQHDNSQQISSNDVQLATTSEDQDNNINEDNNISTNNSKE
TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTLKHKFIDTNKIAYITREFITAKQDLDGAMLSRCGG
TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITTDQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND
EHIIRIENVITEISDIVEKADNSKDKKNDITEAQEK

Sequences:

>Translated_276_residues
MKYLHRNFYILAAICLMAIYHVFSKSDNLVERSISSTNDINQHDNSQQISSNDVQLATTSEDQDNNINEDNNISTNNSKE
TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTLKHKFIDTNKIAYITREFITAKQDLDGAMLSRCGG
TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITTDQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND
EHIIRIENVITEISDIVEKADNSKDKKNDITEAQEK
>Mature_276_residues
MKYLHRNFYILAAICLMAIYHVFSKSDNLVERSISSTNDINQHDNSQQISSNDVQLATTSEDQDNNINEDNNISTNNSKE
TINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHEKIFPTLKHKFIDTNKIAYITREFITAKQDLDGAMLSRCGG
TLMWNKFHTTLLEQQDKWVFNKNYMNWLKDIGKIGGITTDQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND
EHIIRIENVITEISDIVEKADNSKDKKNDITEAQEK

Specific function: May be required for disulfide bond formation in some proteins [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31920; Mature: 31920

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLHRNFYILAAICLMAIYHVFSKSDNLVERSISSTNDINQHDNSQQISSNDVQLATTS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
EDQDNNINEDNNISTNNSKETINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHH
KIFPTLKHKFIDTNKIAYITREFITAKQDLDGAMLSRCGGTLMWNKFHTTLLEQQDKWVF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHCCCEEE
NKNYMNWLKDIGKIGGITTDQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC
EHIIRIENVITEISDIVEKADNSKDKKNDITEAQEK
CCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKYLHRNFYILAAICLMAIYHVFSKSDNLVERSISSTNDINQHDNSQQISSNDVQLATTS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
EDQDNNINEDNNISTNNSKETINSVLKINKYDIVLGNKDSNIKIFEYFSYACYHCARYHE
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHH
KIFPTLKHKFIDTNKIAYITREFITAKQDLDGAMLSRCGGTLMWNKFHTTLLEQQDKWVF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHCCCEEE
NKNYMNWLKDIGKIGGITTDQFLNCFKDEILAQQLMLNTVNISKFEIFDGTPCIIAVIND
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC
EHIIRIENVITEISDIVEKADNSKDKKNDITEAQEK
CCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA