| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183366
Identifier: 189183366
GI number: 189183366
Start: 482167
End: 482853
Strand: Reverse
Name: 189183366
Synonym: OTT_0459
Alternate gene names: NA
Gene position: 482853-482167 (Counterclockwise)
Preceding gene: 189183367
Following gene: 189183365
Centisome position: 24.03
GC content: 34.64
Gene sequence:
>687_bases ATGAAATCAAATAAAAGCCCGAGACACAGCATGATGCCTCAATTGCATCATGCTGCTGAAAGTTTAAATGTAGACAAAGT GCAAGAGCTTATTAAGAATGGGGCTGATCTTAATGCAAAAGACTTTGCTGGTAATACTTGCATATGCATGCTTGCACAGC GTAAGTCAAAATCACATATTGGTTCAAAAGAACGTGAAACGATTAGTAAAATTATTGATATTCTGCGTGAGAATGGTGCT GACAGTACCATAGAAAACAAGGAAGGGCTAAATGCTGTAAATTATTTGTATGTTGGTAAATGTGCTAGAAGAGCAGGCAA AAAAAAATTGCTTTCTGATAATAAAAATAAGAATAATGAAGAGGAAATTTCTAGCAACAAAGATGTTAAGCAGATGATGA TGCCTCAATTGCATCAAGCTGCTGAATGCTTAGATATAGAAAAAGTGAAAGATCTTATAAGTAGTGGAGCAGATATCAAT GCAAAAGATATTACAGGTAGCACTTGCATATGCAGGATGGCAAAACGTTATTCGAACCCATATCTTGACTCAGAAGAACG TAACGCTATTCAAAATATTATGAATATTTTGAGAGAGAATGGTGCTGACTATAACATAACAAACAATAGCGGACAATCTG CTACATCTTTTTTAGATATGAAAAGTGGTAAAAATATAGGGCTTTAG
Upstream 100 bases:
>100_bases AGGATTCAAGAATCAAAAAACCTATAAGCAATAGCCATACATTAAAGATTATAAAGTACTTTAACTTTATTAGTAAATTA AGTTCATTAAGGTAGTAACA
Downstream 100 bases:
>100_bases CTAAAAGAAAAAATTGATTTCTAAAGTAAAATGAAGAGAAGATTTCTCTCCACATTTCAAATAAAGATAGTAATGGTATT AGCGCTATATAGTGCAAGCA
Product: ankyrin repeat-containing protein 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKSNKSPRHSMMPQLHHAAESLNVDKVQELIKNGADLNAKDFAGNTCICMLAQRKSKSHIGSKERETISKIIDILRENGA DSTIENKEGLNAVNYLYVGKCARRAGKKKLLSDNKNKNNEEEISSNKDVKQMMMPQLHQAAECLDIEKVKDLISSGADIN AKDITGSTCICRMAKRYSNPYLDSEERNAIQNIMNILRENGADYNITNNSGQSATSFLDMKSGKNIGL
Sequences:
>Translated_228_residues MKSNKSPRHSMMPQLHHAAESLNVDKVQELIKNGADLNAKDFAGNTCICMLAQRKSKSHIGSKERETISKIIDILRENGA DSTIENKEGLNAVNYLYVGKCARRAGKKKLLSDNKNKNNEEEISSNKDVKQMMMPQLHQAAECLDIEKVKDLISSGADIN AKDITGSTCICRMAKRYSNPYLDSEERNAIQNIMNILRENGADYNITNNSGQSATSFLDMKSGKNIGL >Mature_228_residues MKSNKSPRHSMMPQLHHAAESLNVDKVQELIKNGADLNAKDFAGNTCICMLAQRKSKSHIGSKERETISKIIDILRENGA DSTIENKEGLNAVNYLYVGKCARRAGKKKLLSDNKNKNNEEEISSNKDVKQMMMPQLHQAAECLDIEKVKDLISSGADIN AKDITGSTCICRMAKRYSNPYLDSEERNAIQNIMNILRENGADYNITNNSGQSATSFLDMKSGKNIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25309; Mature: 25309
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNKSPRHSMMPQLHHAAESLNVDKVQELIKNGADLNAKDFAGNTCICMLAQRKSKSHI CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCHHEEHHHHHHHHHHC GSKERETISKIIDILRENGADSTIENKEGLNAVNYLYVGKCARRAGKKKLLSDNKNKNNE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EEISSNKDVKQMMMPQLHQAAECLDIEKVKDLISSGADINAKDITGSTCICRMAKRYSNP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCC YLDSEERNAIQNIMNILRENGADYNITNNSGQSATSFLDMKSGKNIGL CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKSNKSPRHSMMPQLHHAAESLNVDKVQELIKNGADLNAKDFAGNTCICMLAQRKSKSHI CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCHHEEHHHHHHHHHHC GSKERETISKIIDILRENGADSTIENKEGLNAVNYLYVGKCARRAGKKKLLSDNKNKNNE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH EEISSNKDVKQMMMPQLHQAAECLDIEKVKDLISSGADINAKDITGSTCICRMAKRYSNP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCC YLDSEERNAIQNIMNILRENGADYNITNNSGQSATSFLDMKSGKNIGL CCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA