| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183138
Identifier: 189183138
GI number: 189183138
Start: 219424
End: 220932
Strand: Direct
Name: 189183138
Synonym: OTT_0231
Alternate gene names: NA
Gene position: 219424-220932 (Clockwise)
Preceding gene: 189183137
Following gene: 189183139
Centisome position: 10.92
GC content: 26.97
Gene sequence:
>1509_bases ATGAAATTTGTAAAATATATAACAGCTATTTTATTATTAACACTGTTAAATACAACCATTGCATCAAAACGAAACAACAA TCAACCTGTACAACAGAAATTAATTCATGATAAAGCTATATTAGCAGAAAAACATTTTTATGTTGGAATTTCATTTCTTA AGTTAAACAAATATCAAGAAGCGATAGAAAATTTTGATTTAGCTATTAAGTATAATCCTAATTGTGCAGAAGCTTATTAT AATAAAGGAATTTGTTTAGATAAATTAGGACAATTGCAGAAAGCAATAGAAAATTTTGATTTAACTATTAAGTATAAGTC CAATTGCGAAGAAGCATACCTTAGTAAAGGAGTTAGTTTAGGTAAATTAGGACAATTACAGAAAGCGATAGAAAATTTCG ATTTAGCTATTAAGCATAATATTAATTATGAAACAGCATACCTTAATAAAGGAATTTGTTTGTATAAATTAGGACAATAT CATGAGGCAATAGAATGTTGTAATCTAGCTATTAAATATGAGCCCTATAATCCAGATGCTTATCATAGTAAAGGAATGTG TTTAGACAAATTAGGACAATATCATGAGGCAATAGAAAATTTTGATTTAGCTATTAAATATGAGCCCTATAATCCAGATA CTTATAATAATAAAGGAGTTTGTGTAGATAAATTAGGACAACATCAAGAGGCAATAAAAATTTTTAATTTAGCTATTAAG TATAAACCTAATTGTGAAGAAGCATACCTTAATAAAGGAATGTGTTTGTATCAATTAGAACAATATAAAGAGGCAATAGA AAATTTTGATTTAGCTATTAAGTATAAGTCAAACTATGTAGGAGCATACCTTAATAAAGGAGCTTGTTTAAGCAAATTGG AACAACATCAAGAAGCAATAGAAAATTTTGATTTAGCTATTAAATATGAGCTCTGTAATCCAGATACTTATTATAATAAA GGCGCTTGTTTATATGAATTAAGGCAATATCAGGAAGCAGTAGAAAATTTTGATTTAGCTATTAAGTATAATCCTAATTT TGAAAAAGCATACCTTAGTAAAGGCGCTTGTTTATATGAATTAAGGCAATATCAGGAAGCAATAGAATGTTGTAATCTAG CTATTAAGTATAATCCTAATGATGCAGAGGCTTATTATAATAAAGGAGTTTGTTTATTCAAATTAGGACAACATCAAGCA GCGGTAGAAAATTATGATTTAGCTATTAAGTATAACCCTAATTATGTAGACGCTTATTATAATAAAGGACTTTGTTTAAG TAAATTAGGACAAGCTCAAGAAGCAGTAGAAAATTTTAATTTAGCTATTAAGTATAATCCTAATGATGCAGAGGCTTATT ATAATAAAGGACTTTGTTTATATGAATTAAGGCAATATCAGGCAGCAATAGCAAATTTTGATTTAGCTATTAAATATGAT CCTAATAATGGAACGTTATACCAGTTAATAAATATACTCAAACAAGAAATTGCAGGTATTAAAAAGTAA
Upstream 100 bases:
>100_bases AAAAAAAATATAAAAGAAAGAATAATTACAATACCTCTAATTCAGTAATTATTTGGTGTTCAGTAGCTAATCAAAAATTT AAAGGGTAATTAATAATCAT
Downstream 100 bases:
>100_bases TCTTGATTTTTAACACAAGATCTGTAATAAGCAGGTATTATAAGGCATTATCATGATTTATTTGTGATACAAATTGTTAT AAAATAGTCATAAGATATAA
Product: TPR repeat-containing protein 03
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKFVKYITAILLLTLLNTTIASKRNNNQPVQQKLIHDKAILAEKHFYVGISFLKLNKYQEAIENFDLAIKYNPNCAEAYY NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQY HEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK YKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNK GACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQA AVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLAIKYD PNNGTLYQLINILKQEIAGIKK
Sequences:
>Translated_502_residues MKFVKYITAILLLTLLNTTIASKRNNNQPVQQKLIHDKAILAEKHFYVGISFLKLNKYQEAIENFDLAIKYNPNCAEAYY NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQY HEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK YKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNK GACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQA AVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLAIKYD PNNGTLYQLINILKQEIAGIKK >Mature_502_residues MKFVKYITAILLLTLLNTTIASKRNNNQPVQQKLIHDKAILAEKHFYVGISFLKLNKYQEAIENFDLAIKYNPNCAEAYY NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQY HEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK YKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNK GACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQA AVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLAIKYD PNNGTLYQLINILKQEIAGIKK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 9 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=394, Percent_Identity=27.6649746192893, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI32307148, Length=394, Percent_Identity=27.6649746192893, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI310123097, Length=434, Percent_Identity=23.7327188940092, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310110582, Length=491, Percent_Identity=23.6252545824847, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310131789, Length=434, Percent_Identity=23.7327188940092, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI83415184, Length=432, Percent_Identity=23.3796296296296, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI301336134, Length=430, Percent_Identity=23.2558139534884, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI170784867, Length=264, Percent_Identity=25, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI118766330, Length=288, Percent_Identity=23.2638888888889, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI118766328, Length=288, Percent_Identity=23.2638888888889, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI296531396, Length=200, Percent_Identity=29, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI224809432, Length=243, Percent_Identity=24.6913580246914, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI221219056, Length=333, Percent_Identity=23.1231231231231, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI262206280, Length=346, Percent_Identity=22.5433526011561, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI25952122, Length=312, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115532692, Length=393, Percent_Identity=27.4809160305344, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI115532690, Length=393, Percent_Identity=27.4809160305344, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25147174, Length=276, Percent_Identity=20.6521739130435, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17551190, Length=334, Percent_Identity=20.059880239521, Blast_Score=65, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6319387, Length=304, Percent_Identity=25.6578947368421, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17647755, Length=394, Percent_Identity=27.1573604060914, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24585827, Length=394, Percent_Identity=27.1573604060914, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24585829, Length=394, Percent_Identity=27.1573604060914, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI19920486, Length=331, Percent_Identity=26.2839879154079, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI161076610, Length=331, Percent_Identity=26.2839879154079, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI24647123, Length=252, Percent_Identity=25.3968253968254, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI17137540, Length=425, Percent_Identity=20.2352941176471, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24656717, Length=331, Percent_Identity=25.3776435045317, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI18110006, Length=331, Percent_Identity=25.3776435045317, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24659892, Length=299, Percent_Identity=22.4080267558528, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24584630, Length=340, Percent_Identity=22.3529411764706, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008940 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 57799; Mature: 57799
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVKYITAILLLTLLNTTIASKRNNNQPVQQKLIHDKAILAEKHFYVGISFLKLNKYQE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEHHHHHH AIENFDLAIKYNPNCAEAYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSL HHCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCC GKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDA CHHHHHHHHHHCCCEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHCCEEEEECCCCCCC YHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHEEEEEE YKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAI ECCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHH ENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYE HCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCHHHHH LRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYY HHHHHHHHHHCCEEEEECCCCHHHHHCCCEEEEEECCCHHHHCCCEEEEEECCCEEEHHH NKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLAIKYD CCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEE PNNGTLYQLINILKQEIAGIKK CCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFVKYITAILLLTLLNTTIASKRNNNQPVQQKLIHDKAILAEKHFYVGISFLKLNKYQE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEHHHHHH AIENFDLAIKYNPNCAEAYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSL HHCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCC GKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDA CHHHHHHHHHHCCCEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHCCEEEEECCCCCCC YHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHEEEEEE YKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAI ECCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHH ENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYE HCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCHHHHH LRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYY HHHHHHHHHHCCEEEEECCCCHHHHHCCCEEEEEECCCHHHHCCCEEEEEECCCEEEHHH NKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAYYNKGLCLYELRQYQAAIANFDLAIKYD CCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEE PNNGTLYQLINILKQEIAGIKK CCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9697413 [H]