Click here to switch to the map view.

The map label for this gene is traN [H]

Identifier: 189183137

GI number: 189183137

Start: 218540

End: 219172

Strand: Direct

Name: traN [H]

Synonym: OTT_0230

Alternate gene names: 189183137

Gene position: 218540-219172 (Clockwise)

Preceding gene: 189183136

Following gene: 189183138

Centisome position: 10.88

GC content: 34.6

Gene sequence:

>633_bases
ATGCTACACTCATCGTTGCGTAATAACTCGATTTTTTGTTTAGGAGGTAATTGCAACACTCCGACTATTATACCAAACAG
GGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAAGACATTAAAACAAATCCCGTTTCTGTATTTT
CAGGTAAACATCGAAAATGCAAAAAAGACGTATTTAGTTTTTTGAATTGCTGTTCTTCAATGACTGGCTGGGGGCGTGAT
ATAGGCTTATCGCAATGCAAATCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTTACTGCTACTATATTGGAAC
CTACTGTTCTTCAAGAATTCCGATATTAGGTATTTGCTTAACTAGAAAGTCTACTTATTGCTGCTTTCAGTCGAAACTTG
CTAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAATTGAACTTTGGAACACCTGAATGTCCAAAGTGTAGAGGCCTT
ACTGTTAAGGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGATGAACTATTTGGTGATATACTCACTAAGGCTCA
AAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACAAAGTCATCATTAA

Upstream 100 bases:

>100_bases
TCAAAATTGCGAATAAAAAAACAGCACTTGCCAAAAATCTGTAGCAAATATTTGTTTACTCTGACAGCACGATTATAGCT
GTTCAACTGAGAAGCAAGCA

Downstream 100 bases:

>100_bases
TACCACCGCTAATCCCTATAGACTTTATATTAATGACTTTACCTATAAAAATCATACGTATTTAATGTAACATAATTTGT
TATAACCGGTTGTAATAATA

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSHH

Sequences:

>Translated_210_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSHH
>Mature_210_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSHH

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 23873; Mature: 23873

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH
KKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
HHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCCCCEEEEEE
TRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVKELQKVDFTKINMDELFG
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
DILTKAQNSMNKDIIAGIKDKVHRMQQSHH
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH
KKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
HHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCCCCEEEEEE
TRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVKELQKVDFTKINMDELFG
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
DILTKAQNSMNKDIIAGIKDKVHRMQQSHH
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]