| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183139
Identifier: 189183139
GI number: 189183139
Start: 221043
End: 221489
Strand: Direct
Name: 189183139
Synonym: OTT_0232
Alternate gene names: NA
Gene position: 221043-221489 (Clockwise)
Preceding gene: 189183138
Following gene: 189183140
Centisome position: 11.0
GC content: 33.78
Gene sequence:
>447_bases ATGACTATACAACAAAAGGGTGAGTTATTGAGTTGTTTTGATGTTGCTAGCTATTTTCTGGTATTGGTTGATAGAGAAGC AGGAGATATAATAACTCAATTGAAACTGCAAAATTTAGTGTATTTTGCCCAAGGTGTGCATCTAGCTTTATTTGATAAGC CTCTTTTTAAAGAAGATATTGAAGCTTGGGAAAATGGACCTGTAGTACGGCATTTACGTTCGATATTTGGCGGATTTGAA GCTAATGCAATTCCTGCTCCAGGAGAAATAGATTTCAGTATTTATACTAGGCAACAAAAAGAGGTGATTTATAAAATATA TTCTTCTTATGGTGAACATACAGCATCTTATTTGCGCGACTTAACATATTTGCATTCTATTTGGCAAGAAGCTATTATAC GCCCTAGCCGTGTGATTACTAAAGAAGAAATGAGAAAATTTTTTTAA
Upstream 100 bases:
>100_bases TAACACAAGATCTGTAATAAGCAGGTATTATAAGGCATTATCATGATTTATTTGTGATACAAATTGTTATAAAATAGTCA TAAGATATAATAATAAAATT
Downstream 100 bases:
>100_bases AAATCATATAAAAAATATTGAAGATTATCTTTTACCTATTTCAAAAAAAGATACTGCAGAAATAGTAAATGCTGAAGATC AATGGTGGATGAACTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage Protein; Prophage Ps3 Protein; Phage-Associated Protein-Like Protein
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDIEAWENGPVVRHLRSIFGGFE ANAIPAPGEIDFSIYTRQQKEVIYKIYSSYGEHTASYLRDLTYLHSIWQEAIIRPSRVITKEEMRKFF
Sequences:
>Translated_148_residues MTIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDIEAWENGPVVRHLRSIFGGFE ANAIPAPGEIDFSIYTRQQKEVIYKIYSSYGEHTASYLRDLTYLHSIWQEAIIRPSRVITKEEMRKFF >Mature_147_residues TIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDIEAWENGPVVRHLRSIFGGFEA NAIPAPGEIDFSIYTRQQKEVIYKIYSSYGEHTASYLRDLTYLHSIWQEAIIRPSRVITKEEMRKFF
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17183; Mature: 17052
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDI CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH EAWENGPVVRHLRSIFGGFEANAIPAPGEIDFSIYTRQQKEVIYKIYSSYGEHTASYLRD HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTYLHSIWQEAIIRPSRVITKEEMRKFF HHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure TIQQKGELLSCFDVASYFLVLVDREAGDIITQLKLQNLVYFAQGVHLALFDKPLFKEDI CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH EAWENGPVVRHLRSIFGGFEANAIPAPGEIDFSIYTRQQKEVIYKIYSSYGEHTASYLRD HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTYLHSIWQEAIIRPSRVITKEEMRKFF HHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA