| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182974
Identifier: 189182974
GI number: 189182974
Start: 68777
End: 70705
Strand: Reverse
Name: 189182974
Synonym: OTT_0067
Alternate gene names: NA
Gene position: 70705-68777 (Counterclockwise)
Preceding gene: 189182975
Following gene: 189182973
Centisome position: 3.52
GC content: 29.03
Gene sequence:
>1929_bases ATGATATATAAAATCTTCAGAACTTTACTACAATTAGTATTATTAGTAATATTTATTAATCCTTCAAATGCAGAGTGGCA AAATTTAGACGATAGTGCAATAGAAATCAAAGCATGCAGTCTAGATATAGCAATTAATAAAGATGGATCAGAGGAATATT CTGCTTATATGCATGCCAAAATTCTTAAAGATCAAGGTCGGATGTTTTTTGCTAGCTACCGTTTACCATATTTATATAGA GAAAATATTGATACAATAAAAATATTAAAAGCTCAAACAATCTTAAATGGTAAAAAATATACTGTTTCTGCTGATTCTAT AGAAGATAAACCATTAGCTGCTACAGGTCTTGACACTGATATCTATAGACAGATATCAGTAACTTTTCCCAAACTAGAAA TTGGAACAGAAATATTTATAAAGTATAAGGTTACTTTTAAGTCTCCACTTGAAGGAGTCTATAGCTATATTTTAGGATTA TTACCATATGGCTATCATAAAAAAATGCAAATCAATATTAATTCGAAATTACCATTGAATACTAAGATTAATGATCCATA TTGCAAACTACGTGTTAATGCTAGTACTACAAAAATTAATAATGATGAACATACCAATTCTGTTAAAATAACGTTACTGA AACCATTGACTAACCTGTTAAAAAATGAACCAAAAGATTCTGTTCTAAATGAACAATATGATACTTGGGTTTCTGTATCT ACTATTAGTCAATGGGAAGAATTGGGAGATAAATTAAGTAAGGATTACTTTAAAGTTATTAATCAACCATTGCCAAAACT ATTTGCAGCTATTTCTGAAGATGCAAAACAATATTCAAATTATACAGAACAAATTGACTTTGTTACTTCAACATTTAATG AAAAAATACAATATATTCCAGGATGGCGTTCAACTAATGGCAAATTCATTCCTCGAGACTTGATTAAAGTTATGAACTCT GAAAAAGGAGATTGTAGAGACTTTGTTGTTAGTATAGCGGCTATACTAAAAAGTATAGGATATAAAGTATATCCAGCTTT AATCCGTGCAGGAGAAATCTTTACTGTGCCAGTATTACATCTTCCTAATTTTCATAGTTTTGATTATGTAATACTTAAAG TGATTGATAAAGATGATAAGATATACTGGATTGATCCTTGCAATAGTTTAAGCATGGCTAATGGAATGTTTCCTAAGATT GCTAATAGAATGGCATTAGTACTTGATCCAGAAAGATCAAGTTATGAACAAGTATCAAGTATTGATCCAAAACATTCACA AATAATTCATGACAGTACTCTAGAAATAGAAGGTAATATAACTAATTGGAAAGGAGCAATAAGTTATATAGGAGAAAACT CAGCTATTTCACTGCACAATAAATTGCTTTATATGTCTCAGCAACAAATTAAAGAATCATTTTTTAATGATATAAGTGGC ATTTATTTAGAAGAGCATAATAAGAAAAATATAACTTTACCAAGTGTTAATTTGAAGCTGCCAAGAATAGTTAAGGATGG GACCATTGAGTATGAATATAACACTGATTGCCAAATAAAGAAAACTAATGCAGGGCCTGTTTTATTTGCTTCTATAGGTT ACAACTCAGTTTTTAACAATATAATCAGTGTTGCTCCAAAACAAATAGGAGATCTTTTTCTAGGTACTCCTCATACAAAT TATAACAATCTTGTAATCAAGAATCTAAAACTTAAAAATATTGATCATCTTAACTACATAATCGATACTCCATGGATTTA TGTTGAAAGATCATGCAAGCATCAAGGTGATGATACAGAAATCATATCTAAGATAGTTGTACGACAGTCTTTAATACCAA ATAATGATTTAAAAAGTGATGTATATAAAAAGCTGAAGGATGATATTGAACAACACTTTAATAAAACTGCAATAGTTTTA GTTGAGTGA
Upstream 100 bases:
>100_bases ACAAAACTTTGAATCAATAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAAAGATACAGCATACTCTATTAAATAA AGCAGCTATTAAGGTAACTT
Downstream 100 bases:
>100_bases GATATCAAAAAAGCAACAAAGCTATAATGCATAATAATTAATAGTTCAATTTTATTACATTTAAAGTAAGAAAAATTGAA TAAATTAATTGACATTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL VE
Sequences:
>Translated_642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL VE >Mature_642_residues MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL VE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73405; Mature: 73405
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAK CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH ILKDQGRMFFASYRLPYLYRENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTD HHHCCCCEEEEECCCCEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEECCCCHH IYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGLLPYGYHKKMQININSKLPLN HHHEEEEECCEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC TKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCHHHCEEEHH TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECC GWRSTNGKFIPRDLIKVMNSEKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLH CEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE LPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKIANRMALVLDPERSSYEQVSS CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHC IDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG CCCCHHHEEECCEEEEECCCCCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN EEEEECCCCCEEECCCCCCCCCEEECCEEEEEECCCCEEEECCCCCEEEEECCHHHHHHH IISVAPKQIGDLFLGTPHTNYNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTE HHHHCCHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHH IISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLVE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAK CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH ILKDQGRMFFASYRLPYLYRENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTD HHHCCCCEEEEECCCCEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEECCCCHH IYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGLLPYGYHKKMQININSKLPLN HHHEEEEECCEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC TKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCHHHCEEEHH TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECC GWRSTNGKFIPRDLIKVMNSEKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLH CEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE LPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKIANRMALVLDPERSSYEQVSS CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHC IDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG CCCCHHHEEECCEEEEECCCCCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN EEEEECCCCCEEECCCCCCCCCEEECCEEEEEECCCCEEEECCCCCEEEEECCHHHHHHH IISVAPKQIGDLFLGTPHTNYNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTE HHHHCCHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHH IISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLVE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA