Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189182920

Identifier: 189182920

GI number: 189182920

Start: 17930

End: 18949

Strand: Direct

Name: 189182920

Synonym: OTT_0013

Alternate gene names: NA

Gene position: 17930-18949 (Clockwise)

Preceding gene: 189182919

Following gene: 189182921

Centisome position: 0.89

GC content: 29.71

Gene sequence:

>1020_bases
ATGCAAAAAATTATTAATCTTATTACAATTGGTGCTATTATCTATGTATTAGTTACTGGTAAGTTTATTGACTTTTTACA
AACTAACAACAATAGTAATGACGTAGTTGATAGTTCTTCTGCTGCCACAGAAATAAACAGCAAAGAACCAGAGTTTAATG
AGCTTGAAGGCAATTTTTTTGAAAAATCTCTTTCTAAGGTTTTAATCAATGTTTTGAAGACAGATACAGGAAAACAACTA
TTTAAAAATTTGGTTCATCCAGTTGAACAAAAGTCTAACTTAGCAGTTAGTAGCAATACTAAAATTAATAATATTGCGCT
TATTAACTATATCTTTGATATCAAAGACATTACTAAGATACCAGAAGCTAAAGGGCCAGCTTATTGTGGGCAAACAGTAA
CTATTTCTTATCGTATCACTGATGAAAACGATGTTATTATTGAAGAAAAAGTGAAGACACTGAAGCTTGGCGATACAAGA
AAAGCTGATAGTATTGATAATATAACAGTAGGTATGCGTGTTGGAGAAGTTAGAGAAGCGATAATTCCTCAGCAGTATAT
GAATCTTGATACAGTAACCAATCAATCTAATAGTAAAGCATATAAGATTCAAATTACATTACAAGATATTGCATCTTTAA
CTAGTATTAAACAAAACGAAATTAGAATTTGGGATGATGAAATAGTACCATATAAAGTACCATATTTATGCGGGCATTTT
GCAACTTTTGATGCCAAAATCAGCAAGCTTGATGGAACAGTCATATATGATACTACTAGTGAAGATCAAAAAATAGAAAT
GCATTTAGGAGAGAATGATTATCCAATGATTTTTTCATATGCTCTTTTTGATAAAATTCCAGCTGGAAAGAGAACAGTGT
TAACAAAAGGAAAATATTTTAGAAATAGTTTAGATAAAGAGCCAATTAAATTATCTTACGATCTACAATCCAAATTACTT
ACAGATGAGTTTTTTATTCTTGAGCTTTTTAACTTTCAGGAAGGAAGTAATATTCAATGA

Upstream 100 bases:

>100_bases
AATTAAATTTCCAAATATATGTGTTTTACATAAAATTTACTTTTCTTAGATATCAAAACAGCCTTTTAACTGAAAAAGTT
CATTAAAAATAATATATATA

Downstream 100 bases:

>100_bases
CAGAGTCTAAAAATCGACTAGATAAACAACAAAAGACAATGGTTGTGAGCATATTGGGTATGCCAAACTCTGGTAAGTCA
ACCTTACTAAATAGATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQKIINLITIGAIIYVLVTGKFIDFLQTNNNSNDVVDSSSAATEINSKEPEFNELEGNFFEKSLSKVLINVLKTDTGKQL
FKNLVHPVEQKSNLAVSSNTKINNIALINYIFDIKDITKIPEAKGPAYCGQTVTISYRITDENDVIIEEKVKTLKLGDTR
KADSIDNITVGMRVGEVREAIIPQQYMNLDTVTNQSNSKAYKIQITLQDIASLTSIKQNEIRIWDDEIVPYKVPYLCGHF
ATFDAKISKLDGTVIYDTTSEDQKIEMHLGENDYPMIFSYALFDKIPAGKRTVLTKGKYFRNSLDKEPIKLSYDLQSKLL
TDEFFILELFNFQEGSNIQ

Sequences:

>Translated_339_residues
MQKIINLITIGAIIYVLVTGKFIDFLQTNNNSNDVVDSSSAATEINSKEPEFNELEGNFFEKSLSKVLINVLKTDTGKQL
FKNLVHPVEQKSNLAVSSNTKINNIALINYIFDIKDITKIPEAKGPAYCGQTVTISYRITDENDVIIEEKVKTLKLGDTR
KADSIDNITVGMRVGEVREAIIPQQYMNLDTVTNQSNSKAYKIQITLQDIASLTSIKQNEIRIWDDEIVPYKVPYLCGHF
ATFDAKISKLDGTVIYDTTSEDQKIEMHLGENDYPMIFSYALFDKIPAGKRTVLTKGKYFRNSLDKEPIKLSYDLQSKLL
TDEFFILELFNFQEGSNIQ
>Mature_339_residues
MQKIINLITIGAIIYVLVTGKFIDFLQTNNNSNDVVDSSSAATEINSKEPEFNELEGNFFEKSLSKVLINVLKTDTGKQL
FKNLVHPVEQKSNLAVSSNTKINNIALINYIFDIKDITKIPEAKGPAYCGQTVTISYRITDENDVIIEEKVKTLKLGDTR
KADSIDNITVGMRVGEVREAIIPQQYMNLDTVTNQSNSKAYKIQITLQDIASLTSIKQNEIRIWDDEIVPYKVPYLCGHF
ATFDAKISKLDGTVIYDTTSEDQKIEMHLGENDYPMIFSYALFDKIPAGKRTVLTKGKYFRNSLDKEPIKLSYDLQSKLL
TDEFFILELFNFQEGSNIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: NA

Molecular weight: Translated: 38386; Mature: 38386

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00123 ALKALINE_PHOSPHATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIINLITIGAIIYVLVTGKFIDFLQTNNNSNDVVDSSSAATEINSKEPEFNELEGNFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHH
EKSLSKVLINVLKTDTGKQLFKNLVHPVEQKSNLAVSSNTKINNIALINYIFDIKDITKI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCHHHHHHC
PEAKGPAYCGQTVTISYRITDENDVIIEEKVKTLKLGDTRKADSIDNITVGMRVGEVREA
CCCCCCCCCCCEEEEEEEEECCCCEEEECCHHEEECCCCCCCCCCCCEEEEEEHHHHHHH
IIPQQYMNLDTVTNQSNSKAYKIQITLQDIASLTSIKQNEIRIWDDEIVPYKVPYLCGHF
HCCHHHCCCHHCCCCCCCEEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCEECHHHHCCH
ATFDAKISKLDGTVIYDTTSEDQKIEMHLGENDYPMIFSYALFDKIPAGKRTVLTKGKYF
HHHCCCCEECCCEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEECCHHH
RNSLDKEPIKLSYDLQSKLLTDEFFILELFNFQEGSNIQ
HHCCCCCCEEEEECHHHHHHCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MQKIINLITIGAIIYVLVTGKFIDFLQTNNNSNDVVDSSSAATEINSKEPEFNELEGNFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHH
EKSLSKVLINVLKTDTGKQLFKNLVHPVEQKSNLAVSSNTKINNIALINYIFDIKDITKI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCHHHHHHC
PEAKGPAYCGQTVTISYRITDENDVIIEEKVKTLKLGDTRKADSIDNITVGMRVGEVREA
CCCCCCCCCCCEEEEEEEEECCCCEEEECCHHEEECCCCCCCCCCCCEEEEEEHHHHHHH
IIPQQYMNLDTVTNQSNSKAYKIQITLQDIASLTSIKQNEIRIWDDEIVPYKVPYLCGHF
HCCHHHCCCHHCCCCCCCEEEEEEEEHHHHHHHHHCCCCCEEEECCCCCCEECHHHHCCH
ATFDAKISKLDGTVIYDTTSEDQKIEMHLGENDYPMIFSYALFDKIPAGKRTVLTKGKYF
HHHCCCCEECCCEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEECCHHH
RNSLDKEPIKLSYDLQSKLLTDEFFILELFNFQEGSNIQ
HHCCCCCCEEEEECHHHHHHCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA