| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025922
Identifier: 189025922
GI number: 189025922
Start: 766587
End: 767195
Strand: Reverse
Name: 189025922
Synonym: TPASS_0697
Alternate gene names: NA
Gene position: 767195-766587 (Counterclockwise)
Preceding gene: 189025923
Following gene: 189025921
Centisome position: 67.33
GC content: 56.49
Gene sequence:
>609_bases ATGTGCCGCTTGCGCCGTTCGGTGGCGGGGGGGGGTGCGCTCTTTTTGGCGGTGTTGTGGGGTCTTTGCACTGACGCGAA CGCCGCGCAGGTTTTTGTTTCTCCCCGAGTTGGACAGGTGGGAGTCTTTGTGTGGGGAAAGGGCGCGAACGGTGAGGGCG GAACGCAAGGTACGAAACGCACCGATATACTGGCCTTCACCCCCACGCTGGGGCTTTCGGTGGGGGTTTCTGCGGAGAAC GGGTTTACTTTCGTCACGCAGCTAGATGCGGGGCTTTCTACGCTCCTGTTCCGCGCGCAGTTCCTATTGGGGTGGGTACT CCGTATGGGAGAGCGGGCGTTCTTTCTGCCTTCTACGGGTGTGGATATCATGTCTACCAAGGACAAAATAGTCGGTGTTC CTGTGAACCTTGACTTTCATTTCTTTTTTACGGGGGTTGTGGGACTGTCTGTCGGTGTGGCAAGCGGTGTGGGTATCCCG ATTACTGCGAACCTCGAGCAGTGTAAGAACGGCGCAGGCTCCACTGATTTGAAATGGGAACAGTTTTTGCAAAAGTATTG TTTGGAGTGTCCGCTGACGGTGCAGATAGGGCCTGTGTTCCGGGTCTAG
Upstream 100 bases:
>100_bases TCGTGACTTTAATTTCAAGGAGTTTACCTTGCCGCTCTCGCTCACGATAGGGCCGACGTTCCGAGTGTAGTGTATGAGTG GTTGGTGTGAGGGTGAGGTG
Downstream 100 bases:
>100_bases CTTGTGCTGCTGGGGTGGGGTATGCGCGCACGCGCGTGCGCGTTCCTGCGCGCGCTTCCCTATGAGCAGAGCCTTTTTTT TGGTTGATTTTCAAAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MCRLRRSVAGGGALFLAVLWGLCTDANAAQVFVSPRVGQVGVFVWGKGANGEGGTQGTKRTDILAFTPTLGLSVGVSAEN GFTFVTQLDAGLSTLLFRAQFLLGWVLRMGERAFFLPSTGVDIMSTKDKIVGVPVNLDFHFFFTGVVGLSVGVASGVGIP ITANLEQCKNGAGSTDLKWEQFLQKYCLECPLTVQIGPVFRV
Sequences:
>Translated_202_residues MCRLRRSVAGGGALFLAVLWGLCTDANAAQVFVSPRVGQVGVFVWGKGANGEGGTQGTKRTDILAFTPTLGLSVGVSAEN GFTFVTQLDAGLSTLLFRAQFLLGWVLRMGERAFFLPSTGVDIMSTKDKIVGVPVNLDFHFFFTGVVGLSVGVASGVGIP ITANLEQCKNGAGSTDLKWEQFLQKYCLECPLTVQIGPVFRV >Mature_202_residues MCRLRRSVAGGGALFLAVLWGLCTDANAAQVFVSPRVGQVGVFVWGKGANGEGGTQGTKRTDILAFTPTLGLSVGVSAEN GFTFVTQLDAGLSTLLFRAQFLLGWVLRMGERAFFLPSTGVDIMSTKDKIVGVPVNLDFHFFFTGVVGLSVGVASGVGIP ITANLEQCKNGAGSTDLKWEQFLQKYCLECPLTVQIGPVFRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21440; Mature: 21440
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRLRRSVAGGGALFLAVLWGLCTDANAAQVFVSPRVGQVGVFVWGKGANGEGGTQGTKR CCCCCCHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC TDILAFTPTLGLSVGVSAENGFTFVTQLDAGLSTLLFRAQFLLGWVLRMGERAFFLPSTG CEEEEECCCCCEEEEEECCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCC VDIMSTKDKIVGVPVNLDFHFFFTGVVGLSVGVASGVGIPITANLEQCKNGAGSTDLKWE CEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCHH QFLQKYCLECPLTVQIGPVFRV HHHHHHHHCCCCEEEECCEECC >Mature Secondary Structure MCRLRRSVAGGGALFLAVLWGLCTDANAAQVFVSPRVGQVGVFVWGKGANGEGGTQGTKR CCCCCCHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC TDILAFTPTLGLSVGVSAENGFTFVTQLDAGLSTLLFRAQFLLGWVLRMGERAFFLPSTG CEEEEECCCCCEEEEEECCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCC VDIMSTKDKIVGVPVNLDFHFFFTGVVGLSVGVASGVGIPITANLEQCKNGAGSTDLKWE CEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCHH QFLQKYCLECPLTVQIGPVFRV HHHHHHHHCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA