| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025923
Identifier: 189025923
GI number: 189025923
Start: 767226
End: 767771
Strand: Reverse
Name: 189025923
Synonym: TPASS_0698
Alternate gene names: NA
Gene position: 767771-767226 (Counterclockwise)
Preceding gene: 189025924
Following gene: 189025922
Centisome position: 67.38
GC content: 53.11
Gene sequence:
>546_bases ATGAGAAGATTGCTGGCATGTTCGGCGGGGGTGCTGTGTTTTTCCCAGCTTGGCGCGCTTGAGTTGTTTCTTTCTCCTAA GATTGGGATCACGAGTGTGTATCAGTTTGGGAGTAACGGTGGTTCGGACGGTACGTCGTCGGGTAAGGGTGTGTCTTTTG ATAGACTGATTGGAAGGGTTGACCTGGGGCTAATTTTGGTGAACGGCCTAACGATTTCAGCTTCGGCGGAAAGTTCGTTG ACCAATGTCTTTGTGCGTGCACAGGCGTTAATTGGCTACGCGGTGCGTGTGGGAGGGCTGCGGGCCATCGTTTCCAGTGG GGTGAATATCTGCGGTGATTCGTGTGCGACATCTGAGGGGAAATCGTCTGCGTGGTATAGCAAGCTGCTGTACAGCGTAC CGTTGAACTTAGAGGTGCAGTACTATCTCACTTCCTTTGCCGGAGTTGCGGTTGCTGCGAGCACGGCCGTTGGTGTTCGT GACTTTAATTTCAAGGAGTTTACCTTGCCGCTCTCGCTCACGATAGGGCCGACGTTCCGAGTGTAG
Upstream 100 bases:
>100_bases CAGAAGTACTTGACTTTTTTGAGGATAGGGGGGAGACTCCGCCTGGCCGGAGTTCTGAGGCTGGGTATGGACTCTTTTGG AGAGTGGGGGTTGTGTGGGT
Downstream 100 bases:
>100_bases TGTATGAGTGGTTGGTGTGAGGGTGAGGTGATGTGCCGCTTGCGCCGTTCGGTGGCGGGGGGGGGTGCGCTCTTTTTGGC GGTGTTGTGGGGTCTTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRRLLACSAGVLCFSQLGALELFLSPKIGITSVYQFGSNGGSDGTSSGKGVSFDRLIGRVDLGLILVNGLTISASAESSL TNVFVRAQALIGYAVRVGGLRAIVSSGVNICGDSCATSEGKSSAWYSKLLYSVPLNLEVQYYLTSFAGVAVAASTAVGVR DFNFKEFTLPLSLTIGPTFRV
Sequences:
>Translated_181_residues MRRLLACSAGVLCFSQLGALELFLSPKIGITSVYQFGSNGGSDGTSSGKGVSFDRLIGRVDLGLILVNGLTISASAESSL TNVFVRAQALIGYAVRVGGLRAIVSSGVNICGDSCATSEGKSSAWYSKLLYSVPLNLEVQYYLTSFAGVAVAASTAVGVR DFNFKEFTLPLSLTIGPTFRV >Mature_181_residues MRRLLACSAGVLCFSQLGALELFLSPKIGITSVYQFGSNGGSDGTSSGKGVSFDRLIGRVDLGLILVNGLTISASAESSL TNVFVRAQALIGYAVRVGGLRAIVSSGVNICGDSCATSEGKSSAWYSKLLYSVPLNLEVQYYLTSFAGVAVAASTAVGVR DFNFKEFTLPLSLTIGPTFRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y698_TREPA (O83696)
Other databases:
- EMBL: AE000520 - PIR: G71293 - RefSeq: NP_219135.1 - ProteinModelPortal: O83696 - IntAct: O83696 - GeneID: 2611585 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0698 - NMPDR: fig|243276.1.peg.694 - TIGR: TP_0698 - HOGENOM: HBG251041 - ProtClustDB: CLSK2300273 - BioCyc: TPAL243276:TP_0698-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18894; Mature: 18894
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLACSAGVLCFSQLGALELFLSPKIGITSVYQFGSNGGSDGTSSGKGVSFDRLIGRV CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHH DLGLILVNGLTISASAESSLTNVFVRAQALIGYAVRVGGLRAIVSSGVNICGDSCATSEG CEEEEEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KSSAWYSKLLYSVPLNLEVQYYLTSFAGVAVAASTAVGVRDFNFKEFTLPLSLTIGPTFR CCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEECCEEC V C >Mature Secondary Structure MRRLLACSAGVLCFSQLGALELFLSPKIGITSVYQFGSNGGSDGTSSGKGVSFDRLIGRV CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHH DLGLILVNGLTISASAESSLTNVFVRAQALIGYAVRVGGLRAIVSSGVNICGDSCATSEG CEEEEEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KSSAWYSKLLYSVPLNLEVQYYLTSFAGVAVAASTAVGVRDFNFKEFTLPLSLTIGPTFR CCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEECCEEC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876