Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is yqgN [H]

Identifier: 189025919

GI number: 189025919

Start: 763143

End: 763820

Strand: Direct

Name: yqgN [H]

Synonym: TPASS_0694

Alternate gene names: 189025919

Gene position: 763143-763820 (Clockwise)

Preceding gene: 189025911

Following gene: 189025920

Centisome position: 66.97

GC content: 58.55

Gene sequence:

>678_bases
ATGAACGCAAAGCAAAATGCCCGTCGCATCGCTTCCGCACGGCTGCGCGCCTTCCGCGCCTCCCCTACCGCTCCTGCCTA
TCCAGCACACTCCCTTTTCACTGCACAGACAGCGTACCAGCGTGCACGCACTGTGTTCTTCTATGCGCCCCTGCCCCTAG
AAATAGACCCCTACGCCCTTGCATACACTGCAGAAAACGCAGGAAAGCACGTAGCTCTTCCTCGCGTATCGGGAAACGAC
TTGCACTTTCACGCAGTCACGTACGCGTGCACTACCCGCCCCTCTGTTTCCTGCTTCACCACCTTGTGCCCTAGGACCAG
GGGAATTAGAGAACCCGATGCACACAGTCCACGCCTCTACCCCCCGCACCCTTCGCCCAATACTCCTGCACAAAGAACAC
TTGCCCTACCGCTTTTGATCGTAGTTCCCGCACTGGCATTCAGCACAAATGGCGCACGCCTCGGCCGCGGCGGAGGACAC
TACGATCGCTTCCTCGCCCGGATCGCCGCTACCATACCAGCAGGGAGCTACTACACGCTCGGCCTCTGCTTTGATTGCCA
AATCATGGCTGTCATTCCTCAAGAAGCACACGACCAATCCGTACACGCGGTGCTCACCGAAACTCGTCTCATTTCCTGTG
CCACGGCGCGTGCACCAGCGCCACCGTTCTCTTTATAG

Upstream 100 bases:

>100_bases
CACGGGCCCTTCGTTACAGCCACCCTACGATATCCACCAAAGACACATCACGTCTTCTTTTCGTTAGGGACGTGCAGGAC
GACGCCGACACCACCCATAC

Downstream 100 bases:

>100_bases
TGCCTTATTCCTCCATTCTAATCACACACGTGCATGCACCAAGAGGACAGCGCCGTGCTATCTTCCCAGAAAGGAGGATG
AAAACACGTGAAAACCATTC

Product: 5,10-methenyltetrahydrofolate synthetase

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNAKQNARRIASARLRAFRASPTAPAYPAHSLFTAQTAYQRARTVFFYAPLPLEIDPYALAYTAENAGKHVALPRVSGND
LHFHAVTYACTTRPSVSCFTTLCPRTRGIREPDAHSPRLYPPHPSPNTPAQRTLALPLLIVVPALAFSTNGARLGRGGGH
YDRFLARIAATIPAGSYYTLGLCFDCQIMAVIPQEAHDQSVHAVLTETRLISCATARAPAPPFSL

Sequences:

>Translated_225_residues
MNAKQNARRIASARLRAFRASPTAPAYPAHSLFTAQTAYQRARTVFFYAPLPLEIDPYALAYTAENAGKHVALPRVSGND
LHFHAVTYACTTRPSVSCFTTLCPRTRGIREPDAHSPRLYPPHPSPNTPAQRTLALPLLIVVPALAFSTNGARLGRGGGH
YDRFLARIAATIPAGSYYTLGLCFDCQIMAVIPQEAHDQSVHAVLTETRLISCATARAPAPPFSL
>Mature_225_residues
MNAKQNARRIASARLRAFRASPTAPAYPAHSLFTAQTAYQRARTVFFYAPLPLEIDPYALAYTAENAGKHVALPRVSGND
LHFHAVTYACTTRPSVSCFTTLCPRTRGIREPDAHSPRLYPPHPSPNTPAQRTLALPLLIVVPALAFSTNGARLGRGGGH
YDRFLARIAATIPAGSYYTLGLCFDCQIMAVIPQEAHDQSVHAVLTETRLISCATARAPAPPFSL

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: 6.3.3.2

Molecular weight: Translated: 24408; Mature: 24408

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKQNARRIASARLRAFRASPTAPAYPAHSLFTAQTAYQRARTVFFYAPLPLEIDPYAL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCEEE
AYTAENAGKHVALPRVSGNDLHFHAVTYACTTRPSVSCFTTLCPRTRGIREPDAHSPRLY
EEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PPHPSPNTPAQRTLALPLLIVVPALAFSTNGARLGRGGGHYDRFLARIAATIPAGSYYTL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
GLCFDCQIMAVIPQEAHDQSVHAVLTETRLISCATARAPAPPFSL
EEEECCEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MNAKQNARRIASARLRAFRASPTAPAYPAHSLFTAQTAYQRARTVFFYAPLPLEIDPYAL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCEEE
AYTAENAGKHVALPRVSGNDLHFHAVTYACTTRPSVSCFTTLCPRTRGIREPDAHSPRLY
EEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PPHPSPNTPAQRTLALPLLIVVPALAFSTNGARLGRGGGHYDRFLARIAATIPAGSYYTL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
GLCFDCQIMAVIPQEAHDQSVHAVLTETRLISCATARAPAPPFSL
EEEECCEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]