Click here to switch to the map view.

The map label for this gene is 189025920

Identifier: 189025920

GI number: 189025920

Start: 763908

End: 765701

Strand: Direct

Name: 189025920

Synonym: TPASS_0695

Alternate gene names: NA

Gene position: 763908-765701 (Clockwise)

Preceding gene: 189025919

Following gene: 189025933

Centisome position: 67.04

GC content: 59.9

Gene sequence:

>1794_bases
GTGAAAACCATTCTCATACTGGGTGCAGGAACCATGCAAGCCCCTGCACTTCGCGCAGCACGGGAGCTTGGGCTGTGGGT
GTGCGCGGTAGATGGGAATCCGCATGCACCGTGCGCGGCACTTGCAGACGAGTTTACCCCAATCGATTTGGCCGATAGCG
CCGCGCTCGTCGCTCACGCGCGCGCAATTCGCGCGCGMCGCGGCTTGGATGCTGTGTTCACCGCGGCAACAGACTTTTCC
GTTTCCGTCGCTGCCGTCGCCGAGGCCTGTGCACTCCCCGGCCACCGATTGGAGGCAACCAAAAACGCTACGGATAAAAC
GCGCATGCGTGCCTGCTTCACACGCGCCCGACTGCGCTGCCCCCGCTTCACGTTCCTTGAGCCTGACTCGTTCGCCTGGG
ACACACCGCCTGGGCATGCCCGACTGTGTTCCCACCTGCATAGCGCTGGACTCTCGTTTCCTCTCGTCGTAAAACCGACA
GACAACATGGGAGCCCGCGGCTGCACGCTCGCGCAATGCAAGGATACCCTCATAAATGCCTGCGCCGTGGCGCGCCAGTT
CTCTCGCAGCGGCCGGGTGATTATCGAGGAATTTATTGTCGGAAGAGAGTTTTCCCTGGAAGGGCTCATATTCGACGGGA
CGTTGTACGTCACCGCACTTGCCGATCGCCACATCTGCTTTCCTCCCTCATTCGTAGAAATGGGACACACGCTCCCGGCA
GCGCTCTGTACACAAGACGCACAAGCGCTCATCGACACCTTCCACAACGGTGTGCGGGCACTCGGGCTCACCCATGGCGC
CGTGAAAGGAGATCTCTTCCTGAGTACCCCCTCCCCGACGAAAACTCCATCCACTGCCGCCACACCCAACCCTTCTGCCC
CGTACACACCCGAAGCAGTATTGGGAGAAATTGCCGCACGCCTTTCAGGGGGCTTCATGTCTGGCTGGACGGTGCCGTAC
GCTCTGGGTTTCGACGTCACACGCGCTGCATTGCACGTGGCGCTTCACGGTCCTTCAGCTGCCGCCTCGGCTGCCACCGC
GTCTGTCGCCCCCCCTCCTACTGCGCTCACCGTGCTGCGCACACAGCTCACCACTCTGTCTCCTCTTCCAGAAAAAAGCC
CATACGCCAGCGCAGAACGCGCGTGGATTTCCATTCCTGGGGTAATACACCGAATCTGGGGCCTTGCAGACGCTCAACAG
ATCGCCTACGTCAAAAACGTGTTCGTACGTATGCAGGAAGGAGCCGCGGTGCGCTTTCCTCGTAATAATGTGGAAAAATG
TGGCAACGTGCTGAGTCAGGCCCCCACCCGTGCACAGGCTATCGCCGCAGCAGAAACCGCGTGTCGCTGCATTGTACTCC
GCCTTGTTCCTGCACACCCTGCAACAGACGCCTTTCTAGCAAGAAAACGCAGCGCAGAATCAGCGGCCAGCCCAGCGCTC
CAGGACGCTGATTCTGAGTACGCAGCGTCTGCATCACACCCCTTTGGGCAAGAGAGTATACCGGACATCGTCTGCGATGC
CTCAGGACGCTTCTTTACCTCTGAGGTTGCCTGTGCACCGCTCGTGCGCACAGGACTCTTCCTTATCCCCGAGCCACTGG
TGCGCGCTGACGCACGAGACGTGCAGGGTCGCAGCATCCATGCGCTGTGTACCCTTGCACTTAAGGTAGAGCCTGCGCTC
GAACCTGCGCTGTGCTTTGCGCGTTCCCAAAACCTCGCAGAGTTATGGCGCGCACTTATTCGCGGTGGCATTCAAGGATT
ACTATACGCGTTTGACTCCTTTCAACTGTCCTGA

Upstream 100 bases:

>100_bases
GTTCTCTTTATAGTGCCTTATTCCTCCATTCTAATCACACACGTGCATGCACCAAGAGGACAGCGCCGTGCTATCTTCCC
AGAAAGGAGGATGAAAACAC

Downstream 100 bases:

>100_bases
TGTTCAGTGCCAGAAAAAATAAAACGCGTGCGCAAAAGCTCTGCGGCCTCAGTCATACGCAGCCACGTCAGTCCCTGTGC
ACAGAGAGTCTGCACGGACG

Product: phosphoribosylglycinamide formyltransferase

Products: NA

Alternate protein names: Carbamoyl-Phosphate Synthase Large Chain; Phosphoribosylglycinamide Synthetase; Biotin Carboxylase; CarB Family Protein; ATP-Grasp Domain-Containing Protein; Carbamoyl-Phosphate-Synthetase; Glycolate Oxidase; Phosphoribosylglycinamide Formyltransferase; Bifunctional Protein; Carbamoyl-Phosphate Synthase Large Subunit; Oxidase Or Carboxylase; ATP-Grasp Domain Protein

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MKTILILGAGTMQAPALRAARELGLWVCAVDGNPHAPCAALADEFTPIDLADSAALVAHARAIRARRGLDAVFTAATDFS
VSVAAVAEACALPGHRLEATKNATDKTRMRACFTRARLRCPRFTFLEPDSFAWDTPPGHARLCSHLHSAGLSFPLVVKPT
DNMGARGCTLAQCKDTLINACAVARQFSRSGRVIIEEFIVGREFSLEGLIFDGTLYVTALADRHICFPPSFVEMGHTLPA
ALCTQDAQALIDTFHNGVRALGLTHGAVKGDLFLSTPSPTKTPSTAATPNPSAPYTPEAVLGEIAARLSGGFMSGWTVPY
ALGFDVTRAALHVALHGPSAAASAATASVAPPPTALTVLRTQLTTLSPLPEKSPYASAERAWISIPGVIHRIWGLADAQQ
IAYVKNVFVRMQEGAAVRFPRNNVEKCGNVLSQAPTRAQAIAAAETACRCIVLRLVPAHPATDAFLARKRSAESAASPAL
QDADSEYAASASHPFGQESIPDIVCDASGRFFTSEVACAPLVRTGLFLIPEPLVRADARDVQGRSIHALCTLALKVEPAL
EPALCFARSQNLAELWRALIRGGIQGLLYAFDSFQLS

Sequences:

>Translated_597_residues
MKTILILGAGTMQAPALRAARELGLWVCAVDGNPHAPCAALADEFTPIDLADSAALVAHARAIRARRGLDAVFTAATDFS
VSVAAVAEACALPGHRLEATKNATDKTRMRACFTRARLRCPRFTFLEPDSFAWDTPPGHARLCSHLHSAGLSFPLVVKPT
DNMGARGCTLAQCKDTLINACAVARQFSRSGRVIIEEFIVGREFSLEGLIFDGTLYVTALADRHICFPPSFVEMGHTLPA
ALCTQDAQALIDTFHNGVRALGLTHGAVKGDLFLSTPSPTKTPSTAATPNPSAPYTPEAVLGEIAARLSGGFMSGWTVPY
ALGFDVTRAALHVALHGPSAAASAATASVAPPPTALTVLRTQLTTLSPLPEKSPYASAERAWISIPGVIHRIWGLADAQQ
IAYVKNVFVRMQEGAAVRFPRNNVEKCGNVLSQAPTRAQAIAAAETACRCIVLRLVPAHPATDAFLARKRSAESAASPAL
QDADSEYAASASHPFGQESIPDIVCDASGRFFTSEVACAPLVRTGLFLIPEPLVRADARDVQGRSIHALCTLALKVEPAL
EPALCFARSQNLAELWRALIRGGIQGLLYAFDSFQLS
>Mature_597_residues
MKTILILGAGTMQAPALRAARELGLWVCAVDGNPHAPCAALADEFTPIDLADSAALVAHARAIRARRGLDAVFTAATDFS
VSVAAVAEACALPGHRLEATKNATDKTRMRACFTRARLRCPRFTFLEPDSFAWDTPPGHARLCSHLHSAGLSFPLVVKPT
DNMGARGCTLAQCKDTLINACAVARQFSRSGRVIIEEFIVGREFSLEGLIFDGTLYVTALADRHICFPPSFVEMGHTLPA
ALCTQDAQALIDTFHNGVRALGLTHGAVKGDLFLSTPSPTKTPSTAATPNPSAPYTPEAVLGEIAARLSGGFMSGWTVPY
ALGFDVTRAALHVALHGPSAAASAATASVAPPPTALTVLRTQLTTLSPLPEKSPYASAERAWISIPGVIHRIWGLADAQQ
IAYVKNVFVRMQEGAAVRFPRNNVEKCGNVLSQAPTRAQAIAAAETACRCIVLRLVPAHPATDAFLARKRSAESAASPAL
QDADSEYAASASHPFGQESIPDIVCDASGRFFTSEVACAPLVRTGLFLIPEPLVRADARDVQGRSIHALCTLALKVEPAL
EPALCFARSQNLAELWRALIRGGIQGLLYAFDSFQLS

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63326; Mature: 63326

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILILGAGTMQAPALRAARELGLWVCAVDGNPHAPCAALADEFTPIDLADSAALVAHA
CCEEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
RAIRARRGLDAVFTAATDFSVSVAAVAEACALPGHRLEATKNATDKTRMRACFTRARLRC
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
PRFTFLEPDSFAWDTPPGHARLCSHLHSAGLSFPLVVKPTDNMGARGCTLAQCKDTLINA
CCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
CAVARQFSRSGRVIIEEFIVGREFSLEGLIFDGTLYVTALADRHICFPPSFVEMGHTLPA
HHHHHHHHCCCCEEEHHHHCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHCCCCHH
ALCTQDAQALIDTFHNGVRALGLTHGAVKGDLFLSTPSPTKTPSTAATPNPSAPYTPEAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LGEIAARLSGGFMSGWTVPYALGFDVTRAALHVALHGPSAAASAATASVAPPPTALTVLR
HHHHHHHHCCCCCCCCCCCEEECCHHHHHEEEEEECCCCHHHHHCCCCCCCCCHHHHHHH
TQLTTLSPLPEKSPYASAERAWISIPGVIHRIWGLADAQQIAYVKNVFVRMQEGAAVRFP
HHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECC
RNNVEKCGNVLSQAPTRAQAIAAAETACRCIVLRLVPAHPATDAFLARKRSAESAASPAL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCH
QDADSEYAASASHPFGQESIPDIVCDASGRFFTSEVACAPLVRTGLFLIPEPLVRADARD
HCCCCHHHCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCCCHHHHCCCCC
VQGRSIHALCTLALKVEPALEPALCFARSQNLAELWRALIRGGIQGLLYAFDSFQLS
CCCCEEEEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTILILGAGTMQAPALRAARELGLWVCAVDGNPHAPCAALADEFTPIDLADSAALVAHA
CCEEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
RAIRARRGLDAVFTAATDFSVSVAAVAEACALPGHRLEATKNATDKTRMRACFTRARLRC
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCC
PRFTFLEPDSFAWDTPPGHARLCSHLHSAGLSFPLVVKPTDNMGARGCTLAQCKDTLINA
CCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
CAVARQFSRSGRVIIEEFIVGREFSLEGLIFDGTLYVTALADRHICFPPSFVEMGHTLPA
HHHHHHHHCCCCEEEHHHHCCCCCCCCEEEECCEEEEEEECCCCCCCCCHHHHHCCCCHH
ALCTQDAQALIDTFHNGVRALGLTHGAVKGDLFLSTPSPTKTPSTAATPNPSAPYTPEAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LGEIAARLSGGFMSGWTVPYALGFDVTRAALHVALHGPSAAASAATASVAPPPTALTVLR
HHHHHHHHCCCCCCCCCCCEEECCHHHHHEEEEEECCCCHHHHHCCCCCCCCCHHHHHHH
TQLTTLSPLPEKSPYASAERAWISIPGVIHRIWGLADAQQIAYVKNVFVRMQEGAAVRFP
HHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECC
RNNVEKCGNVLSQAPTRAQAIAAAETACRCIVLRLVPAHPATDAFLARKRSAESAASPAL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCH
QDADSEYAASASHPFGQESIPDIVCDASGRFFTSEVACAPLVRTGLFLIPEPLVRADARD
HCCCCHHHCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHCCCCCCCCHHHHCCCCC
VQGRSIHALCTLALKVEPALEPALCFARSQNLAELWRALIRGGIQGLLYAFDSFQLS
CCCCEEEEEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA