| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is mglC
Identifier: 189025911
GI number: 189025911
Start: 752546
End: 754141
Strand: Direct
Name: mglC
Synonym: TPASS_0686
Alternate gene names: 189025911
Gene position: 752546-754141 (Clockwise)
Preceding gene: 189025910
Following gene: 189025919
Centisome position: 66.04
GC content: 51.94
Gene sequence:
>1596_bases ATGCGCGATCGTACACAGTGTGTGGCGGTGCCAACTCAAGCGTTCAATGAGATTTTAGATCAGGACGGTCAGCTCACCGC GTACGCCCAAAGGCTCGAGCAGTTACGAGAGCGCGGTTCCCATAGGGTTGCCTTGCTCCGCGGGGAGCTTGCGCGCATAC GGCAGGATCAGGTCTTGGGCATGCCGGAGAAAAGGGTGCAGGTTGCGGCGCACAGGCTCAAGATTTCCGAAGCGCAGGCC GTTGCACGACAGTGCAAAACTGAGGAAACGCAGTTGGTTAGGAAGGCTGTCGCGCGTGTAAGGGGGCTCTTTCGAGACTT TGACTGCTCTGTGCGCGACGCGATGCGCGAACAGCGGCTCTTGCTAAAGCAAGTTGCGACGGTGCAGCACACCTCTGCCT CATCTGACCAAAGAGAGCACTGTCTGGCTCAGCTCCGGCAATGCAAGGAGGCGCGACACCACGCCTACCGTTCCTTGGTC GAAAAGAGCGCTGCGCTGCGGAACGGGAAAATGACGTTTATCGAGCGCGTGGTGCGTGCTCTTAGAGAATATTCGTTCAA TTTTGACGCAACCCAGTTCTTCCTCGCAAATGGTTTGTACATTGCTATTGCGGTATTCTTTATTGCGTGCATCGTAGTTG CACCTTTCTCTGGTAATGGCAATCTTCTTACCATTCCCAACATTCTCACCATACTGGAGCAGTCTTCAGTGCGCATGTTC TATGCGGTGGGAGTAGCAGGTATTATCCTGCTGGCAGGAACTGACCTCAGCATTGGGCGTATGGTGGCAATGGGGTCTGT AGTCACGGGTATTATTCTTCATCCGGGACAGAATATCGTTACATTTTTTGGACTGGGGCCGTGGGATTTTACCCCTGTCC CCATGGCTGTCCGTGTAGTCATGTCACTTGCAGTTTCTGTCGCACTTTGCGTTTCGTTCAGCCTATTTGCAGGATTCTTT TCTGCTCGCCTCAAAATACACCCTTTCATTTCAACTCTTGCAACGCAGCTTATCATCTACGGGGTTTTGTTTTTTGGGAC AAGTGGTACGCCAGTTGGCTCTATTGACCCATACATCAAAGACCTATTCGGTGGGCGGTGGATTCTAGGCACCATGCAGG GCACACTCGTGACCTTCCCAAAGCTGATAATTCCTGCCACCATTGCGGTGGCCATCGCGTGGTTCATTTGGAACAAGACG ATTCTAGGAAAAAATATGTACGCCGTTGGAGGGAATGCTGAGGCAGCGAATGTTAGCGGCATCAGTGTTTTCGGGGTGAC TATGAGCGTTTTTGCAATGGCAGCTGTGTTTTATGGCTTTGGCGCGTTTTTTGAGACGTTCAAGGCAAATGCAAGTGCGG GCACTGGTCAGGGTTATGAGCTCGACGCAATTGCCTCCTGTGTGGTAGGGGGTATCTCCTTCAACGGGGGAATCGGAAAA CTCGAGGGTGCCGTGGTAGGCGTAATCATTTTCACCGGTCTTACCTATTGTCTGACTTTTTTAGGCATCGATACAAATCT TCAGTTCGTGTTCAAGGGTTTGATCATCATCGCTGCAGTTGCACTCGACAGTGTGAAGTATCTGAAACGCCGCTAG
Upstream 100 bases:
>100_bases TGTCCAATTATCGATTGGCTGGGATTGTGGATACAAAGAGTACCGATCAGGAAGCCTTGCTCAGACTTTCTGCGCGATAC CTGTAGGGAGGAGCAGATAC
Downstream 100 bases:
>100_bases TTCTTGCCCCGCTGGGCGGGACGTCAACGTTCACAATACGAATAAGCCGGGCGCCTTTCTGGGCCATTGTTCCCTCTTTG GCTAACTCAGGGTGTGGGCT
Product: methylgalactoside ABC transporter, permease protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MRDRTQCVAVPTQAFNEILDQDGQLTAYAQRLEQLRERGSHRVALLRGELARIRQDQVLGMPEKRVQVAAHRLKISEAQA VARQCKTEETQLVRKAVARVRGLFRDFDCSVRDAMREQRLLLKQVATVQHTSASSDQREHCLAQLRQCKEARHHAYRSLV EKSAALRNGKMTFIERVVRALREYSFNFDATQFFLANGLYIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMF YAVGVAGIILLAGTDLSIGRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVVMSLAVSVALCVSFSLFAGFF SARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIKDLFGGRWILGTMQGTLVTFPKLIIPATIAVAIAWFIWNKT ILGKNMYAVGGNAEAANVSGISVFGVTMSVFAMAAVFYGFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGK LEGAVVGVIIFTGLTYCLTFLGIDTNLQFVFKGLIIIAAVALDSVKYLKRR
Sequences:
>Translated_531_residues MRDRTQCVAVPTQAFNEILDQDGQLTAYAQRLEQLRERGSHRVALLRGELARIRQDQVLGMPEKRVQVAAHRLKISEAQA VARQCKTEETQLVRKAVARVRGLFRDFDCSVRDAMREQRLLLKQVATVQHTSASSDQREHCLAQLRQCKEARHHAYRSLV EKSAALRNGKMTFIERVVRALREYSFNFDATQFFLANGLYIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMF YAVGVAGIILLAGTDLSIGRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVVMSLAVSVALCVSFSLFAGFF SARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIKDLFGGRWILGTMQGTLVTFPKLIIPATIAVAIAWFIWNKT ILGKNMYAVGGNAEAANVSGISVFGVTMSVFAMAAVFYGFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGK LEGAVVGVIIFTGLTYCLTFLGIDTNLQFVFKGLIIIAAVALDSVKYLKRR >Mature_531_residues MRDRTQCVAVPTQAFNEILDQDGQLTAYAQRLEQLRERGSHRVALLRGELARIRQDQVLGMPEKRVQVAAHRLKISEAQA VARQCKTEETQLVRKAVARVRGLFRDFDCSVRDAMREQRLLLKQVATVQHTSASSDQREHCLAQLRQCKEARHHAYRSLV EKSAALRNGKMTFIERVVRALREYSFNFDATQFFLANGLYIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMF YAVGVAGIILLAGTDLSIGRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVVMSLAVSVALCVSFSLFAGFF SARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIKDLFGGRWILGTMQGTLVTFPKLIIPATIAVAIAWFIWNKT ILGKNMYAVGGNAEAANVSGISVFGVTMSVFAMAAVFYGFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGK LEGAVVGVIIFTGLTYCLTFLGIDTNLQFVFKGLIIIAAVALDSVKYLKRR
Specific function: Part of the binding-protein-dependent transport system for galactoside. Probably responsible for the translocation of the substrate across the membrane
COG id: COG4211
COG function: function code G; ABC-type glucose/galactose transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily
Homologues:
Organism=Escherichia coli, GI1788471, Length=338, Percent_Identity=39.9408284023669, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1790191, Length=307, Percent_Identity=31.2703583061889, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI145693152, Length=340, Percent_Identity=28.5294117647059, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1790524, Length=324, Percent_Identity=31.4814814814815, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1789992, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788896, Length=324, Percent_Identity=27.1604938271605, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI87082395, Length=297, Percent_Identity=29.96632996633, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MGLC_TREPA (Q57321)
Other databases:
- EMBL: U48416 - EMBL: U45323 - EMBL: AE000520 - PIR: JC5172 - RefSeq: NP_219123.1 - ProteinModelPortal: Q57321 - IntAct: Q57321 - GeneID: 2611431 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0686 - NMPDR: fig|243276.1.peg.682 - TIGR: TP_0686 - HOGENOM: HBG663180 - OMA: DFFKQNA - ProtClustDB: CLSK218818 - BioCyc: TPAL243276:TP_0686-MONOMER - InterPro: IPR001851
Pfam domain/function: PF02653 BPD_transp_2
EC number: NA
Molecular weight: Translated: 57876; Mature: 57876
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x21630c94)-; HASH(0x20b46fa4)-; HASH(0x215a1910)-; HASH(0x21582950)-; HASH(0x215ab2ac)-; HASH(0x20b86e64)-; HASH(0x215ade30)-; HASH(0x20cbe568)-; HASH(0x21907010)-; HASH(0x21584974)-;
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRTQCVAVPTQAFNEILDQDGQLTAYAQRLEQLRERGSHRVALLRGELARIRQDQVLG CCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC MPEKRVQVAAHRLKISEAQAVARQCKTEETQLVRKAVARVRGLFRDFDCSVRDAMREQRL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLKQVATVQHTSASSDQREHCLAQLRQCKEARHHAYRSLVEKSAALRNGKMTFIERVVRA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LREYSFNFDATQFFLANGLYIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMF HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCHHHH YAVGVAGIILLAGTDLSIGRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHH MSLAVSVALCVSFSLFAGFFSARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIK HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH DLFGGRWILGTMQGTLVTFPKLIIPATIAVAIAWFIWNKTILGKNMYAVGGNAEAANVSG HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC ISVFGVTMSVFAMAAVFYGFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCH LEGAVVGVIIFTGLTYCLTFLGIDTNLQFVFKGLIIIAAVALDSVKYLKRR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MRDRTQCVAVPTQAFNEILDQDGQLTAYAQRLEQLRERGSHRVALLRGELARIRQDQVLG CCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC MPEKRVQVAAHRLKISEAQAVARQCKTEETQLVRKAVARVRGLFRDFDCSVRDAMREQRL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LLKQVATVQHTSASSDQREHCLAQLRQCKEARHHAYRSLVEKSAALRNGKMTFIERVVRA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LREYSFNFDATQFFLANGLYIAIAVFFIACIVVAPFSGNGNLLTIPNILTILEQSSVRMF HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCHHHH YAVGVAGIILLAGTDLSIGRMVAMGSVVTGIILHPGQNIVTFFGLGPWDFTPVPMAVRVV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHH MSLAVSVALCVSFSLFAGFFSARLKIHPFISTLATQLIIYGVLFFGTSGTPVGSIDPYIK HHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH DLFGGRWILGTMQGTLVTFPKLIIPATIAVAIAWFIWNKTILGKNMYAVGGNAEAANVSG HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC ISVFGVTMSVFAMAAVFYGFGAFFETFKANASAGTGQGYELDAIASCVVGGISFNGGIGK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCH LEGAVVGVIIFTGLTYCLTFLGIDTNLQFVFKGLIIIAAVALDSVKYLKRR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8921855; 8988365; 9665876