Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025918

Identifier: 189025918

GI number: 189025918

Start: 761661

End: 762983

Strand: Reverse

Name: 189025918

Synonym: TPASS_0693

Alternate gene names: NA

Gene position: 762983-761661 (Counterclockwise)

Preceding gene: 189025921

Following gene: 189025917

Centisome position: 66.96

GC content: 56.69

Gene sequence:

>1323_bases
ATGGACCGTTTTTTTTGTACGGTGTGGGTGTGGAGTGTGCTTTTTGGCGCCTGTACGTCACAGACACGCTCAAGTTTTTC
CCTGAATGCGGATGGCCTGAATTCTTCGGGTGTGGCCCATGCTTCTGAGCATGTTTCTCATGCTGCGGCAATGGGGAATG
AGGCGGGCGCGGCAGATGCGAGTGTGTCTGAATCCCCGGCGTCTTTTTCTCCTGGGCGGGGGTCTGCGTGGGTGCAGGGT
ACTGTTGGACATATCCCTGCCGAGCACCACGCGGCATTGCAGGCGTTTTTTGACACAGAAGAGGGTATGCGCATCACGGA
TGCGCTCTGTACGGGGGACACATACGCTGCTTTCAATGAGCTTGAAGCGTTATATGACCCTTCTTCTGAGACTGACACGG
CGCGTAGCCGTGCGCTGCACGCGTATGTCCGTGCGCTGCTGCAAGGTATACGCCTTGCTCCGCGCGTTGCACCGCCGACC
CATGTAGGGGTTAGTGCCACGTTGCAGTATCGCGACAGCGTGTGGCCACTACAGCGTGGGCGTTTTACGCTATGCTACCA
AATTGGTCCTGAACATGGCGATGTGATGCAGGTGACGCTGTGCGCAGATACGCAGGGAGTGCTCTTTTTCCCCTTTCCGT
CAGCGGCGCTTTCGCAGGAGGTGACGCTTTCGTTTGACACTGCCGCTTTGGTACATGCTCCTTCCCTTTGTGCACAGGAT
TCTGCGTTGCAGGAACGACCCTCATCTCCCGAACCTGTCGTGTCTACCATACCGTCCCCCGAGGGGGAAGAAAACAGCGC
AGCGGGGGAGCCTGCGCTTGCTAATTTGGTGTGTCGCGTTGCGGCGCCTTCGTCTGATCCAAAACAGCATCCCGTGCGCA
GGCAGGTATCTACAACGATATGTATTCTAGATTATGGGAAGACAGGACGGCCGCTGACGCACGAGAATCTGACGGCCACC
CGTTTGCTCGGGGGGCTTTTGAAGCGTCGGTTTGTGAACATCGGGCTTGATAGTTTGTACGGGGTAGGTAAGGTGCCGGA
CCACGCGGTAATCGCGCGCGCGCGTAAAAAGTTTGGGGGGAATGTCCGTAGACTTGTGTTTGGCTTGACTCAGGTAAGGC
GTCTTGAACGCGACTCTGATGCACGCTGGAAGTGTGTGCTGTTCGCGCAGCTGCATGTGTGGGATTTCCCAAAGGGAGCG
TATACGCATCACTTTACTGCACAGTGCACGGAGACCGGGGATACTGAATCTCAAAGTTATGTTCGTGCGCGTACGCGCAT
GGGCGAGACGGTGCTTTCGGACGTGCTCCAGTGCTTCCTGTAA

Upstream 100 bases:

>100_bases
TTTGGTGGATATCGTAGGGTGGCTGTAACGAAGGGCCCGTGACGGTACTTTAGCACGCGGCTGTGGTGTGCGCTGCAGAA
TAAAGAGGTGTAGATTATAC

Downstream 100 bases:

>100_bases
TTGTGTTTATTTCGTAGATCGGGGTATGGGGATAGGATGAGAGGGTGTTCCCCGGGGTTTGTACAGCGTTTTGAAGAATT
GACGCGTGTGTTGTTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MDRFFCTVWVWSVLFGACTSQTRSSFSLNADGLNSSGVAHASEHVSHAAAMGNEAGAADASVSESPASFSPGRGSAWVQG
TVGHIPAEHHAALQAFFDTEEGMRITDALCTGDTYAAFNELEALYDPSSETDTARSRALHAYVRALLQGIRLAPRVAPPT
HVGVSATLQYRDSVWPLQRGRFTLCYQIGPEHGDVMQVTLCADTQGVLFFPFPSAALSQEVTLSFDTAALVHAPSLCAQD
SALQERPSSPEPVVSTIPSPEGEENSAAGEPALANLVCRVAAPSSDPKQHPVRRQVSTTICILDYGKTGRPLTHENLTAT
RLLGGLLKRRFVNIGLDSLYGVGKVPDHAVIARARKKFGGNVRRLVFGLTQVRRLERDSDARWKCVLFAQLHVWDFPKGA
YTHHFTAQCTETGDTESQSYVRARTRMGETVLSDVLQCFL

Sequences:

>Translated_440_residues
MDRFFCTVWVWSVLFGACTSQTRSSFSLNADGLNSSGVAHASEHVSHAAAMGNEAGAADASVSESPASFSPGRGSAWVQG
TVGHIPAEHHAALQAFFDTEEGMRITDALCTGDTYAAFNELEALYDPSSETDTARSRALHAYVRALLQGIRLAPRVAPPT
HVGVSATLQYRDSVWPLQRGRFTLCYQIGPEHGDVMQVTLCADTQGVLFFPFPSAALSQEVTLSFDTAALVHAPSLCAQD
SALQERPSSPEPVVSTIPSPEGEENSAAGEPALANLVCRVAAPSSDPKQHPVRRQVSTTICILDYGKTGRPLTHENLTAT
RLLGGLLKRRFVNIGLDSLYGVGKVPDHAVIARARKKFGGNVRRLVFGLTQVRRLERDSDARWKCVLFAQLHVWDFPKGA
YTHHFTAQCTETGDTESQSYVRARTRMGETVLSDVLQCFL
>Mature_440_residues
MDRFFCTVWVWSVLFGACTSQTRSSFSLNADGLNSSGVAHASEHVSHAAAMGNEAGAADASVSESPASFSPGRGSAWVQG
TVGHIPAEHHAALQAFFDTEEGMRITDALCTGDTYAAFNELEALYDPSSETDTARSRALHAYVRALLQGIRLAPRVAPPT
HVGVSATLQYRDSVWPLQRGRFTLCYQIGPEHGDVMQVTLCADTQGVLFFPFPSAALSQEVTLSFDTAALVHAPSLCAQD
SALQERPSSPEPVVSTIPSPEGEENSAAGEPALANLVCRVAAPSSDPKQHPVRRQVSTTICILDYGKTGRPLTHENLTAT
RLLGGLLKRRFVNIGLDSLYGVGKVPDHAVIARARKKFGGNVRRLVFGLTQVRRLERDSDARWKCVLFAQLHVWDFPKGA
YTHHFTAQCTETGDTESQSYVRARTRMGETVLSDVLQCFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y693_TREPA (O83691)

Other databases:

- EMBL:   AE000520
- PIR:   B71293
- RefSeq:   NP_219130.1
- ProteinModelPortal:   O83691
- IntAct:   O83691
- GeneID:   2611781
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0693
- NMPDR:   fig|243276.1.peg.689
- TIGR:   TP_0693
- HOGENOM:   HBG251039
- ProtClustDB:   CLSK2300270
- BioCyc:   TPAL243276:TP_0693-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47673; Mature: 47673

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFFCTVWVWSVLFGACTSQTRSSFSLNADGLNSSGVAHASEHVSHAAAMGNEAGAADA
CCCEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
SVSESPASFSPGRGSAWVQGTVGHIPAEHHAALQAFFDTEEGMRITDALCTGDTYAAFNE
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHH
LEALYDPSSETDTARSRALHAYVRALLQGIRLAPRVAPPTHVGVSATLQYRDSVWPLQRG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RFTLCYQIGPEHGDVMQVTLCADTQGVLFFPFPSAALSQEVTLSFDTAALVHAPSLCAQD
CEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCHHHCCCEEEEECCHHHHHCCHHHHCC
SALQERPSSPEPVVSTIPSPEGEENSAAGEPALANLVCRVAAPSSDPKQHPVRRQVSTTI
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHCEEE
CILDYGKTGRPLTHENLTATRLLGGLLKRRFVNIGLDSLYGVGKVPDHAVIARARKKFGG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHCC
NVRRLVFGLTQVRRLERDSDARWKCVLFAQLHVWDFPKGAYTHHFTAQCTETGDTESQSY
CHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHH
VRARTRMGETVLSDVLQCFL
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDRFFCTVWVWSVLFGACTSQTRSSFSLNADGLNSSGVAHASEHVSHAAAMGNEAGAADA
CCCEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
SVSESPASFSPGRGSAWVQGTVGHIPAEHHAALQAFFDTEEGMRITDALCTGDTYAAFNE
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHH
LEALYDPSSETDTARSRALHAYVRALLQGIRLAPRVAPPTHVGVSATLQYRDSVWPLQRG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCC
RFTLCYQIGPEHGDVMQVTLCADTQGVLFFPFPSAALSQEVTLSFDTAALVHAPSLCAQD
CEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCHHHCCCEEEEECCHHHHHCCHHHHCC
SALQERPSSPEPVVSTIPSPEGEENSAAGEPALANLVCRVAAPSSDPKQHPVRRQVSTTI
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCHHHHHHCEEE
CILDYGKTGRPLTHENLTATRLLGGLLKRRFVNIGLDSLYGVGKVPDHAVIARARKKFGG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHCC
NVRRLVFGLTQVRRLERDSDARWKCVLFAQLHVWDFPKGAYTHHFTAQCTETGDTESQSY
CHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCHHHH
VRARTRMGETVLSDVLQCFL
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876