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The map label for this gene is recA

Identifier: 189025917

GI number: 189025917

Start: 760177

End: 761400

Strand: Reverse

Name: recA

Synonym: TPASS_0692

Alternate gene names: 189025917

Gene position: 761400-760177 (Counterclockwise)

Preceding gene: 189025918

Following gene: 189025916

Centisome position: 66.82

GC content: 51.1

Gene sequence:

>1224_bases
GTGTCAAAAGCCCTTAAAGGGGATGTTCCCGTTAGTTCTTCTTTTGAAGAAAAGATGAAGGCGTTGGAGGCGGCGCGCCT
CCAGATCGAAAAGCAGTTTGGCCAAGGTTCCCTCATGAAGTTAGGGAAGGATGACGCAGTCCAAGGTGTTGAAGTTATTC
CCACGGGAAATATTTTGCTTGACGAGGCATTAGGTATCGGCGGTTATCCGCGCGGTAGGATTATTGAAATATTTGGTCCT
GAGTCGTCTGGCAAAACAACCCTTGCGCTGCACGCGGTTGCAGAAGCGCAAAAGCGTGGAGGTATCGCAGCCTTTATCGA
TGCTGAGCACGCGCTTGACCCACAGTATGCGAAGGATCTTGGCGTGTCCGTCGGTGATCTGTGGATATCGCAGCCAGATA
CAGGGGAGCAAGCGTTAGAGATTGCCGAAAGTCTTGTGCGTTCAGGTGCGGTGGATATTATCGTGGTGGATTCTGTTGCC
GCGCTCACGCCTCAGGCAGAAATACAGGGGGATATGGGGGATGCCCACGTAGGTCTGATCGCGCGTCTTATGAGTCAGGC
GTTGCGTAAGCTTACTTCTATCATCAATAAGTCGAAGTGTACGCTCATTTTTATTAATCAGCTCCGCATGAAAATAGGGA
TTATGTTTGGGAATCCTGAGACTACTACCGGCGGCATTGCACTTAAGTTTTATTCCTCCGTGAGGATAGAGGTTAGGAAG
GTGGAAACGCTTTCAAGAGGTGATGAGGAAGCGTGGGGCAATAAGGTAAGGATCCGGATAGTAAAGAATAAGATGGCACC
CCCCTTCCGCAAGGTAGAAACGGAGATTCTCTTTGGGAAGGGTTTTTCTGCCTTTTCGTGTTTGCTGGATGCAGCGGTTA
AGCAGGAAATTATCGAAAAAAAAGGGGCGTGGTACGCGTACCGAGAAGAAAAGATCGGACAGGGGCGTGACAATGCCGTG
GGCTTTCTGCAGCAGAATATGGACATCACCTTGGAGATCGAACGGGCAGTGCGTACGAAGCTTTTTCCTAAGCAGGCGTT
TATATCCAGCTTTCAGGAACATCGTCCTGCTCTCTCTCTTGAGGCGTCTCCGGAGGAGTCGGACGCAAAAACGTTGCGGC
GTTMTGCAAGCAGGGGTGCGGGCGCGTCGAGTAGTCGGGTGCAGGAGGGATCTGCAGCGAATGACCATTTTCAGGACGAA
TCGACCACGGCGAAACTCCTTTAG

Upstream 100 bases:

>100_bases
GCGGGTCGCCGGTTCAAGTCCAGCTGGGCCCATACTATTTGTGTGCAGGTGGTAGCGCGTCTCTTGCGCCTTGCGCGGGG
TTTTTCATGGGAGGCTTGTG

Downstream 100 bases:

>100_bases
TCAGTGGCCGCCAGCGCGTGGAAATAGATGTGGATGGATGAGTCTCCCGTCCCTGTGCAAGAGTTTAAACTTTCTCAGTT
TGAGGGTCCTTTGGACCTCC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSKALKGDVPVSSSFEEKMKALEAARLQIEKQFGQGSLMKLGKDDAVQGVEVIPTGNILLDEALGIGGYPRGRIIEIFGP
ESSGKTTLALHAVAEAQKRGGIAAFIDAEHALDPQYAKDLGVSVGDLWISQPDTGEQALEIAESLVRSGAVDIIVVDSVA
ALTPQAEIQGDMGDAHVGLIARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETTTGGIALKFYSSVRIEVRK
VETLSRGDEEAWGNKVRIRIVKNKMAPPFRKVETEILFGKGFSAFSCLLDAAVKQEIIEKKGAWYAYREEKIGQGRDNAV
GFLQQNMDITLEIERAVRTKLFPKQAFISSFQEHRPALSLEASPEESDAKTLRRXASRGAGASSSRVQEGSAANDHFQDE
STTAKLL

Sequences:

>Translated_407_residues
MSKALKGDVPVSSSFEEKMKALEAARLQIEKQFGQGSLMKLGKDDAVQGVEVIPTGNILLDEALGIGGYPRGRIIEIFGP
ESSGKTTLALHAVAEAQKRGGIAAFIDAEHALDPQYAKDLGVSVGDLWISQPDTGEQALEIAESLVRSGAVDIIVVDSVA
ALTPQAEIQGDMGDAHVGLIARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETTTGGIALKFYSSVRIEVRK
VETLSRGDEEAWGNKVRIRIVKNKMAPPFRKVETEILFGKGFSAFSCLLDAAVKQEIIEKKGAWYAYREEKIGQGRDNAV
GFLQQNMDITLEIERAVRTKLFPKQAFISSFQEHRPALSLEASPEESDAKTLRRXASRGAGASSSRVQEGSAANDHFQDE
STTAKLL
>Mature_406_residues
SKALKGDVPVSSSFEEKMKALEAARLQIEKQFGQGSLMKLGKDDAVQGVEVIPTGNILLDEALGIGGYPRGRIIEIFGPE
SSGKTTLALHAVAEAQKRGGIAAFIDAEHALDPQYAKDLGVSVGDLWISQPDTGEQALEIAESLVRSGAVDIIVVDSVAA
LTPQAEIQGDMGDAHVGLIARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETTTGGIALKFYSSVRIEVRKV
ETLSRGDEEAWGNKVRIRIVKNKMAPPFRKVETEILFGKGFSAFSCLLDAAVKQEIIEKKGAWYAYREEKIGQGRDNAVG
FLQQNMDITLEIERAVRTKLFPKQAFISSFQEHRPALSLEASPEESDAKTLRRXASRGAGASSSRVQEGSAANDHFQDES
TTAKLL

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=327, Percent_Identity=59.3272171253823, Blast_Score=399, Evalue=1e-112,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_TREPA (O83690)

Other databases:

- EMBL:   AE000520
- PIR:   A71293
- RefSeq:   NP_219129.1
- ProteinModelPortal:   O83690
- SMR:   O83690
- GeneID:   2611770
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0692
- NMPDR:   fig|243276.1.peg.688
- TIGR:   TP_0692
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   TPAL243276:TP_0692-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 44162; Mature: 44031

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKALKGDVPVSSSFEEKMKALEAARLQIEKQFGQGSLMKLGKDDAVQGVEVIPTGNILL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCEEE
DEALGIGGYPRGRIIEIFGPESSGKTTLALHAVAEAQKRGGIAAFIDAEHALDPQYAKDL
EHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHCCCHHHHHHH
GVSVGDLWISQPDTGEQALEIAESLVRSGAVDIIVVDSVAALTPQAEIQGDMGDAHVGLI
CCCHHHEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHCCCCCCHHHHHH
ARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETTTGGIALKFYSSVRIEVRK
HHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCEEEEEEE
VETLSRGDEEAWGNKVRIRIVKNKMAPPFRKVETEILFGKGFSAFSCLLDAAVKQEIIEK
HHHHHCCCHHHCCCEEEEEEEECCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH
KGAWYAYREEKIGQGRDNAVGFLQQNMDITLEIERAVRTKLFPKQAFISSFQEHRPALSL
CCCEEEEHHHHCCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHCCCCEEE
EASPEESDAKTLRRXASRGAGASSSRVQEGSAANDHFQDESTTAKLL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SKALKGDVPVSSSFEEKMKALEAARLQIEKQFGQGSLMKLGKDDAVQGVEVIPTGNILL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCEEE
DEALGIGGYPRGRIIEIFGPESSGKTTLALHAVAEAQKRGGIAAFIDAEHALDPQYAKDL
EHHCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHCCCHHHHHHH
GVSVGDLWISQPDTGEQALEIAESLVRSGAVDIIVVDSVAALTPQAEIQGDMGDAHVGLI
CCCHHHEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHCCCCCCHHHHHH
ARLMSQALRKLTSIINKSKCTLIFINQLRMKIGIMFGNPETTTGGIALKFYSSVRIEVRK
HHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEECCEEEEEEE
VETLSRGDEEAWGNKVRIRIVKNKMAPPFRKVETEILFGKGFSAFSCLLDAAVKQEIIEK
HHHHHCCCHHHCCCEEEEEEEECCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH
KGAWYAYREEKIGQGRDNAVGFLQQNMDITLEIERAVRTKLFPKQAFISSFQEHRPALSL
CCCEEEEHHHHCCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHCCCCEEE
EASPEESDAKTLRRXASRGAGASSSRVQEGSAANDHFQDESTTAKLL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876