Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 189025916

GI number: 189025916

Start: 759391

End: 760149

Strand: Reverse

Name: scpA [H]

Synonym: TPASS_0691

Alternate gene names: 189025916

Gene position: 760149-759391 (Counterclockwise)

Preceding gene: 189025917

Following gene: 189025915

Centisome position: 66.71

GC content: 46.77

Gene sequence:

>759_bases
ATGTGGATGGATGAGTCTCCCGTCCCTGTGCAAGAGTTTAAACTTTCTCAGTTTGAGGGTCCTTTGGACCTCCTGCTGTT
TCTCATCAAAAAGAACGAGCTGAGCATTTACGATATTCCTATTTGCGAAATTACTGCTCAGTATCTGCAGTACGTGGATC
AAACCGTCTCGCCCGATCTCCGTGGTCTGACGGAGTTTTACGCAATGGCTGCGGTTCTTCTGTACATTAAAAGCTGCATG
CTCCTCCCAATGGAACTAGATCTAGATGGTGAGGATATCGAGGATCCTCGGCAGTCGCTGGTGGAGCACCTTATCGAATA
TCAAAAATACAAGCAACTTTGCAAGCTGATGGAGCTGTATGAGTGTGAAGACATGTGGTGCGTTGAGCGAAAAAAGACGC
AGCATCTGTTTTTGTCTCCAGCAGAAGTGCCTCTCCTACACGGTGACGTTCGTGATTTGCTGATGCTCTTTATTCGGTTA
GTGAGAAAGACGCCTCAGTGGATTATGGATTTGTACGAAGAAGTTTCGGTAAATGAGAAGCTGACATTGCTTTCGGAATT
GCTTGGGGTTCGGGGGCGGTGTGTATTTACTGAGCTTATTAAGCAGCCGTCTCGTGCAGATGTTGTGTGTGCCTTTGTCG
CAATTTTAGAGGCGGCAAAAACGCATCTTGTGCATATTTCACAGCCTGAATTTTTTGGCCCGATTACTCTATATGCGCGG
GAGGTTTCTCCCAAGGTTCAGGACGTATGTCATGCGTAA

Upstream 100 bases:

>100_bases
TAGTCGGGTGCAGGAGGGATCTGCAGCGAATGACCATTTTCAGGACGAATCGACCACGGCGAAACTCCTTTAGTCAGTGG
CCGCCAGCGCGTGGAAATAG

Downstream 100 bases:

>100_bases
TGTGTTCGTAGGGGCGCTGTGCATGTGCGGCATGTCTTTTGTCTTTTCCGATTCCGTGCGGAGTGCCGCCGCCGCGTATT
TCTCGCATTTCTCGTGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MWMDESPVPVQEFKLSQFEGPLDLLLFLIKKNELSIYDIPICEITAQYLQYVDQTVSPDLRGLTEFYAMAAVLLYIKSCM
LLPMELDLDGEDIEDPRQSLVEHLIEYQKYKQLCKLMELYECEDMWCVERKKTQHLFLSPAEVPLLHGDVRDLLMLFIRL
VRKTPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIKQPSRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYAR
EVSPKVQDVCHA

Sequences:

>Translated_252_residues
MWMDESPVPVQEFKLSQFEGPLDLLLFLIKKNELSIYDIPICEITAQYLQYVDQTVSPDLRGLTEFYAMAAVLLYIKSCM
LLPMELDLDGEDIEDPRQSLVEHLIEYQKYKQLCKLMELYECEDMWCVERKKTQHLFLSPAEVPLLHGDVRDLLMLFIRL
VRKTPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIKQPSRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYAR
EVSPKVQDVCHA
>Mature_252_residues
MWMDESPVPVQEFKLSQFEGPLDLLLFLIKKNELSIYDIPICEITAQYLQYVDQTVSPDLRGLTEFYAMAAVLLYIKSCM
LLPMELDLDGEDIEDPRQSLVEHLIEYQKYKQLCKLMELYECEDMWCVERKKTQHLFLSPAEVPLLHGDVRDLLMLFIRL
VRKTPQWIMDLYEEVSVNEKLTLLSELLGVRGRCVFTELIKQPSRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYAR
EVSPKVQDVCHA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29231; Mature: 29231

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMDESPVPVQEFKLSQFEGPLDLLLFLIKKNELSIYDIPICEITAQYLQYVDQTVSPDL
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCHH
RGLTEFYAMAAVLLYIKSCMLLPMELDLDGEDIEDPRQSLVEHLIEYQKYKQLCKLMELY
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ECEDMWCVERKKTQHLFLSPAEVPLLHGDVRDLLMLFIRLVRKTPQWIMDLYEEVSVNEK
CCCHHHHHHHHHCHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
LTLLSELLGVRGRCVFTELIKQPSRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYAR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHCHHHHHHH
EVSPKVQDVCHA
HCCHHHHHHHCC
>Mature Secondary Structure
MWMDESPVPVQEFKLSQFEGPLDLLLFLIKKNELSIYDIPICEITAQYLQYVDQTVSPDL
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCHH
RGLTEFYAMAAVLLYIKSCMLLPMELDLDGEDIEDPRQSLVEHLIEYQKYKQLCKLMELY
HHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ECEDMWCVERKKTQHLFLSPAEVPLLHGDVRDLLMLFIRLVRKTPQWIMDLYEEVSVNEK
CCCHHHHHHHHHCHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
LTLLSELLGVRGRCVFTELIKQPSRADVVCAFVAILEAAKTHLVHISQPEFFGPITLYAR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHCHHHHHHH
EVSPKVQDVCHA
HCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA