Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025871

Identifier: 189025871

GI number: 189025871

Start: 708749

End: 710071

Strand: Reverse

Name: 189025871

Synonym: TPASS_0646

Alternate gene names: NA

Gene position: 710071-708749 (Counterclockwise)

Preceding gene: 189025872

Following gene: 189025870

Centisome position: 62.32

GC content: 49.96

Gene sequence:

>1323_bases
ATGGGCAGGATGCGGAAGGTCGCGTGCGCATTCCGCAAGCTTTGGTGCCGTTTTGTGGTTTTGAGTATCTCTATCCTCGT
GTCCTGTAGCGTTGTGACGCGTCACCCGTTGCGGTTGGGATTTTTTACTTTTTTCTTGCTGGGTAGTTTTCTCGTGTTGG
TGTCTTCCTGCACACGGTGGATGGGGCGTGAATTGCATGGGCAACGTCTGTTCGCCCTAACGTACGGGGATGCTGAAAAT
CAACTGCATTTCCCCGACGCGGGGTATGCGCAATCGCAGTCTAATATACAGCTGTGTATGAAAGACGGTATTTTCTACGT
GGCACATGCTGCAACTGGCAAGGTCATGCGAATGACTTCGTTTGGGGATGTGCTTGCAGTTATTTTTAATCCCGAGAAAA
ACGCAATGACTCCTCAGTTCTCTGAAGGGTTGCAATCGGCAGCAATTACTACGCGTCGTGCCGTGCCCTATCCGCTGCAT
GCGCCAACGTTTCTTGCCGTAGATTCGCAGAATACACTGTACGTAGTAGATGCCGTGTTACCAGAACACGTGCAGCATGA
TCCGGAAGAAAACCTTGCGCTGGTGAATACCATATTGCTGTTCGATGAGGAAGGACGTTTCATGCATGCTATTGGACAGC
AGGGGATAGGGGGCACACCCTTTCCTGCTATTGAAGGTGTGTATGTAAATAGTGCAGATGAGCTCGTGGTGGTGTGTAGG
AGTGTGGATGCAATGAGAGTGTATTGGTTCAATGCACAACGAGTACCCATACACCAACGTGCGTTGCCGTTTTCTCCGCT
TCCGACGTCATTTGCTGCGCAAGAGAAAGGGTATGCATTCGTAGAGCGGGTACTGCCTGATGTGAGTGAACGGAGGCTGA
TTGCAAAGGTAGATTACTATACCGCAGTGCATGATCCAGCTACGGGAGCAAATAGTAGTGTTCGCTATGCGAAAAGCAGT
GTGTATTTTATCTCTCTTGAAACGGGGGTGTACGAGTGGAAAGTGGATCTTCCCGCGCACGAGGTGTCTGGTACAGAAAA
CCAAGAAAGGGGACCTTATAAAAAAGCTTTTTCATTGCTCGGGGTGAGTGCGCAGCAAGGTATTTTGTGTGTGAGTCCGG
ACCGCTTCGGATATGCCGCGCTATTGTTAGACTTGCGTTCATTCACGATACGTCAAAGGAGCATACATATGCGCAGTGAT
ACGTTGGTGTACAATGTGTTTCATTTTTCTCCCACAGGGATTCTTTCTTCAGTGCTGGCGACGGACACAGAGGCGGTCGT
TATGTGGTGGCGGTTCGACCGGATACTGAGCCGCATCAAGTGA

Upstream 100 bases:

>100_bases
AATGTCCGCTATAAGGATGCAGAAGGGAAGAAGCATTATGTACACATGTTGAATGGGACGGCGCTTGCAATTTCTCGCGT
GTTAATTGCGCTGCTAGAAA

Downstream 100 bases:

>100_bases
TACGGCATGAATAGGAATCTGAGAAGGAGATGCACCCTCTAGCAATAGGTTTCATGCTGTGCGCGCGGTATTGACACGCA
CGCAGTTCTTATTTTCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MGRMRKVACAFRKLWCRFVVLSISILVSCSVVTRHPLRLGFFTFFLLGSFLVLVSSCTRWMGRELHGQRLFALTYGDAEN
QLHFPDAGYAQSQSNIQLCMKDGIFYVAHAATGKVMRMTSFGDVLAVIFNPEKNAMTPQFSEGLQSAAITTRRAVPYPLH
APTFLAVDSQNTLYVVDAVLPEHVQHDPEENLALVNTILLFDEEGRFMHAIGQQGIGGTPFPAIEGVYVNSADELVVVCR
SVDAMRVYWFNAQRVPIHQRALPFSPLPTSFAAQEKGYAFVERVLPDVSERRLIAKVDYYTAVHDPATGANSSVRYAKSS
VYFISLETGVYEWKVDLPAHEVSGTENQERGPYKKAFSLLGVSAQQGILCVSPDRFGYAALLLDLRSFTIRQRSIHMRSD
TLVYNVFHFSPTGILSSVLATDTEAVVMWWRFDRILSRIK

Sequences:

>Translated_440_residues
MGRMRKVACAFRKLWCRFVVLSISILVSCSVVTRHPLRLGFFTFFLLGSFLVLVSSCTRWMGRELHGQRLFALTYGDAEN
QLHFPDAGYAQSQSNIQLCMKDGIFYVAHAATGKVMRMTSFGDVLAVIFNPEKNAMTPQFSEGLQSAAITTRRAVPYPLH
APTFLAVDSQNTLYVVDAVLPEHVQHDPEENLALVNTILLFDEEGRFMHAIGQQGIGGTPFPAIEGVYVNSADELVVVCR
SVDAMRVYWFNAQRVPIHQRALPFSPLPTSFAAQEKGYAFVERVLPDVSERRLIAKVDYYTAVHDPATGANSSVRYAKSS
VYFISLETGVYEWKVDLPAHEVSGTENQERGPYKKAFSLLGVSAQQGILCVSPDRFGYAALLLDLRSFTIRQRSIHMRSD
TLVYNVFHFSPTGILSSVLATDTEAVVMWWRFDRILSRIK
>Mature_439_residues
GRMRKVACAFRKLWCRFVVLSISILVSCSVVTRHPLRLGFFTFFLLGSFLVLVSSCTRWMGRELHGQRLFALTYGDAENQ
LHFPDAGYAQSQSNIQLCMKDGIFYVAHAATGKVMRMTSFGDVLAVIFNPEKNAMTPQFSEGLQSAAITTRRAVPYPLHA
PTFLAVDSQNTLYVVDAVLPEHVQHDPEENLALVNTILLFDEEGRFMHAIGQQGIGGTPFPAIEGVYVNSADELVVVCRS
VDAMRVYWFNAQRVPIHQRALPFSPLPTSFAAQEKGYAFVERVLPDVSERRLIAKVDYYTAVHDPATGANSSVRYAKSSV
YFISLETGVYEWKVDLPAHEVSGTENQERGPYKKAFSLLGVSAQQGILCVSPDRFGYAALLLDLRSFTIRQRSIHMRSDT
LVYNVFHFSPTGILSSVLATDTEAVVMWWRFDRILSRIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49329; Mature: 49198

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMRKVACAFRKLWCRFVVLSISILVSCSVVTRHPLRLGFFTFFLLGSFLVLVSSCTRW
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGRELHGQRLFALTYGDAENQLHFPDAGYAQSQSNIQLCMKDGIFYVAHAATGKVMRMTS
HHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEEC
FGDVLAVIFNPEKNAMTPQFSEGLQSAAITTRRAVPYPLHAPTFLAVDSQNTLYVVDAVL
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECC
PEHVQHDPEENLALVNTILLFDEEGRFMHAIGQQGIGGTPFPAIEGVYVNSADELVVVCR
HHHHCCCCCCCCEEEEEEEEECCCCCEEEHHCCCCCCCCCCCCCCEEEECCCCCEEEEEE
SVDAMRVYWFNAQRVPIHQRALPFSPLPTSFAAQEKGYAFVERVLPDVSERRLIAKVDYY
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCHHCEEEEEEEEE
TAVHDPATGANSSVRYAKSSVYFISLETGVYEWKVDLPAHEVSGTENQERGPYKKAFSLL
EEECCCCCCCCCCEEEEECEEEEEEEECCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHH
GVSAQQGILCVSPDRFGYAALLLDLRSFTIRQRSIHMRSDTLVYNVFHFSPTGILSSVLA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCHHHHHHHHHH
TDTEAVVMWWRFDRILSRIK
CCCCCEEEEHHHHHHHHHCC
>Mature Secondary Structure 
GRMRKVACAFRKLWCRFVVLSISILVSCSVVTRHPLRLGFFTFFLLGSFLVLVSSCTRW
CCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGRELHGQRLFALTYGDAENQLHFPDAGYAQSQSNIQLCMKDGIFYVAHAATGKVMRMTS
HHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEEC
FGDVLAVIFNPEKNAMTPQFSEGLQSAAITTRRAVPYPLHAPTFLAVDSQNTLYVVDAVL
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECC
PEHVQHDPEENLALVNTILLFDEEGRFMHAIGQQGIGGTPFPAIEGVYVNSADELVVVCR
HHHHCCCCCCCCEEEEEEEEECCCCCEEEHHCCCCCCCCCCCCCCEEEECCCCCEEEEEE
SVDAMRVYWFNAQRVPIHQRALPFSPLPTSFAAQEKGYAFVERVLPDVSERRLIAKVDYY
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCHHCEEEEEEEEE
TAVHDPATGANSSVRYAKSSVYFISLETGVYEWKVDLPAHEVSGTENQERGPYKKAFSLL
EEECCCCCCCCCCEEEEECEEEEEEEECCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHH
GVSAQQGILCVSPDRFGYAALLLDLRSFTIRQRSIHMRSDTLVYNVFHFSPTGILSSVLA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEEEECCHHHHHHHHHH
TDTEAVVMWWRFDRILSRIK
CCCCCEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA