Click here to switch to the map view.

The map label for this gene is 189025870

Identifier: 189025870

GI number: 189025870

Start: 708514

End: 708690

Strand: Reverse

Name: 189025870

Synonym: TPASS_0645

Alternate gene names: NA

Gene position: 708690-708514 (Counterclockwise)

Preceding gene: 189025871

Following gene: 189025869

Centisome position: 62.2

GC content: 55.37

Gene sequence:

>177_bases
GTGCGCGCGGTATTGACACGCACGCAGTTCTTATTTTCCCTGTATCGCGGGAGTGACCATACGGTCTGCCAGGCAGATGC
GAGCACTCACCGTATGGCTGTTGTGTGTATTCGGCACTGCCACCTATGTGGAAGTGTAGGATGTGCGCGTGGGAAGTGCG
TACTGGCTTGGCTTTAA

Upstream 100 bases:

>100_bases
ATGTGGTGGCGGTTCGACCGGATACTGAGCCGCATCAAGTGATACGGCATGAATAGGAATCTGAGAAGGAGATGCACCCT
CTAGCAATAGGTTTCATGCT

Downstream 100 bases:

>100_bases
AAATATTTTGCGTACCTGTAAGGAAGGATCATGAGTATCTGTGAAAAGTCACTTCATTGGGCTGACAAGGTTGCGCACAA
GATTATCAAGGAATGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MRAVLTRTQFLFSLYRGSDHTVCQADASTHRMAVVCIRHCHLCGSVGCARGKCVLAWL

Sequences:

>Translated_58_residues
MRAVLTRTQFLFSLYRGSDHTVCQADASTHRMAVVCIRHCHLCGSVGCARGKCVLAWL
>Mature_58_residues
MRAVLTRTQFLFSLYRGSDHTVCQADASTHRMAVVCIRHCHLCGSVGCARGKCVLAWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y645_TREPA (O83651)

Other databases:

- EMBL:   AE000520
- PIR:   D71299
- RefSeq:   NP_219082.1
- ProteinModelPortal:   O83651
- GeneID:   2611791
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0645
- NMPDR:   fig|243276.1.peg.641
- TIGR:   TP_0645
- HOGENOM:   HBG732073
- ProtClustDB:   CLSK2300262
- BioCyc:   TPAL243276:TP_0645-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6438; Mature: 6438

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
13.8 %Cys+Met (Translated Protein)
10.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
13.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVLTRTQFLFSLYRGSDHTVCQADASTHRMAVVCIRHCHLCGSVGCARGKCVLAWL
CCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRAVLTRTQFLFSLYRGSDHTVCQADASTHRMAVVCIRHCHLCGSVGCARGKCVLAWL
CCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876