| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is manB [H]
Identifier: 189025867
GI number: 189025867
Start: 704496
End: 706256
Strand: Direct
Name: manB [H]
Synonym: TPASS_0642
Alternate gene names: 189025867
Gene position: 704496-706256 (Clockwise)
Preceding gene: 189025865
Following gene: 189025868
Centisome position: 61.83
GC content: 49.69
Gene sequence:
>1761_bases ATGCACTCCAGTCAATTGTTCGAACGTGCTCGTCTTTATCTTGAAGAAGAAACAGATCCTTTCTTTGCACAGCAGGTACG GGATCTTGTTGCACAGAATAATATAGCAGAGCTCGAAGAGCGCTTTTTGCAAACTCTTTCGTTTGGCACCGCCGGGCTGC GGGGTGTTGTCGGCGGAGGAACAAACAGAATGAACCCCTTCATGATCAAAAAGATCACGCACGCGATTGCGCTCTATTTA CTAAAAACTTTTCCTGAAAAGGCAGCGCGCGGCGCGCTCCGTGCCGTTATAGCCTACGACTCGCGTGTACATTCTCGTCT GTTCGCACACACTGCTGCGCACGTGTTTCTTGCACATGACATTACCGCCTACCTCTTTTCGGATCCACGCCCGACTCCAG AACTTTCCTACGCAGTACAGTATCTTACCTGTGACGTGGGCATCGTGGTCACCGCATCGCACAACCCACCGCAGTATAAC GGATACAAAGTGTACTGGAACGACGGGGCACAGATAGCGCATCCTCACGAAAAAAATATCACCGAAGAAATGAACGCTAT CACGAGTGTCGTGAACCTTGAGGAAAAGGTACCTGTCAAACGCAGTGCACCCACGATCATTGATGCAGAAATTGATGAAC CGTACTGCACCTCTATAAAGGAAAAGCTTTTTCGCCCCGGTCTTACGAAAGAGACCGTCCAGTCGATGCGTATTGCATAC ACCCCATTACACGGAACGGGTGCACTCCACGTCGAGCGCATACTGGGGGATATGGGGTTCTCCATTATGACCGTGCCTGA GCAACGGTTGCCAGATGGGAACTTCCCTACGGTGTCGTCTCCTAATCCAGAAGATCCGGCCGCGTTGGTGCATGCGTGTG CATATGCTGATCGCGTACATGCTGAGGTTCTTATGGCGACTGATCCTGACGCAGACCGCTTTGCATGTGCAGTAAGAAAC ACCCGCGGTGTGTTGCAGTTGCTCACGGGCAATCAAATGGGAGCGCTCTTCACTGACTACATTCTGCTAACCCTGCAGGA ACAAAACAATATGCCCGCGCGTCCTGCAATTGTACGCTCCGTTGTTACGTCCCCACTTAGCGACCGTATAGCACGCACAT ATGGCGCAACGTGTGTAGAGTGCCTTACCGGATTCAAATGGATATGTGGTACTGCAGAAAAGATTTCACAGTCAGGAGCG TACTCCTACGTATATGGATTTGAAGAAAGTTACGGACACAATTTTGGTATTCAGGTGAGAGACAAAGACGGTATCAACGC CGCAGCGCTCTGTGCAGAAATGGGTGTGTACTGGAAGTTGCGCGGAATGAGCCTGATCGATCGCCTTCACCAGTTATTCA GGACGCATGGCCTGTTTTGTGAAAAGACGCTGAACAAAACCTATGCGGGCGTCGCGGGTGTAAGCACCATGAATGCAATA ATGAATACGCTCAGGAGACAGCCGCTAACCCAAATTGCGCGCAAGCGGGTAATGAAGGTGAGGGATATATATCTTGGTGT TGAGTTTAGTCCAGAAAATCCTGCGCAGACATCTGCCCTTTCTTTTCCTCAGAGTAACGTGCTGCAGTATTTTGTACAGG ATGGCAGTATTGTAAGTATACGACCGAGTGGAACAGAACAAAAAATAAAGTGTTATATCATCCACCCTCTGACCGTCAGT ACCTCGATAGAAGAAGCAGAACAGGCGGGCAACATGTTTATCACCGCAGTTGAACAAGAGATGGGTACATATCTGCAATG A
Upstream 100 bases:
>100_bases TTTTGTGAGCATTGCACAGAGCAGCACCTTCCCATTACAATGCCCCTCTATCCTGTGGTGCCGTAAATAGTCCAGTACTT TTAAAGGTGAGGAAGCGCTC
Downstream 100 bases:
>100_bases TATATGATTGGGTTTTTGCGGTGCATGAACACGTTGCATTCACCGCCTTCGACACCGAAACAACTGGTTTAAAAGCAGAA GAAGATCGCATTATAGAAAT
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MHSSQLFERARLYLEEETDPFFAQQVRDLVAQNNIAELEERFLQTLSFGTAGLRGVVGGGTNRMNPFMIKKITHAIALYL LKTFPEKAARGALRAVIAYDSRVHSRLFAHTAAHVFLAHDITAYLFSDPRPTPELSYAVQYLTCDVGIVVTASHNPPQYN GYKVYWNDGAQIAHPHEKNITEEMNAITSVVNLEEKVPVKRSAPTIIDAEIDEPYCTSIKEKLFRPGLTKETVQSMRIAY TPLHGTGALHVERILGDMGFSIMTVPEQRLPDGNFPTVSSPNPEDPAALVHACAYADRVHAEVLMATDPDADRFACAVRN TRGVLQLLTGNQMGALFTDYILLTLQEQNNMPARPAIVRSVVTSPLSDRIARTYGATCVECLTGFKWICGTAEKISQSGA YSYVYGFEESYGHNFGIQVRDKDGINAAALCAEMGVYWKLRGMSLIDRLHQLFRTHGLFCEKTLNKTYAGVAGVSTMNAI MNTLRRQPLTQIARKRVMKVRDIYLGVEFSPENPAQTSALSFPQSNVLQYFVQDGSIVSIRPSGTEQKIKCYIIHPLTVS TSIEEAEQAGNMFITAVEQEMGTYLQ
Sequences:
>Translated_586_residues MHSSQLFERARLYLEEETDPFFAQQVRDLVAQNNIAELEERFLQTLSFGTAGLRGVVGGGTNRMNPFMIKKITHAIALYL LKTFPEKAARGALRAVIAYDSRVHSRLFAHTAAHVFLAHDITAYLFSDPRPTPELSYAVQYLTCDVGIVVTASHNPPQYN GYKVYWNDGAQIAHPHEKNITEEMNAITSVVNLEEKVPVKRSAPTIIDAEIDEPYCTSIKEKLFRPGLTKETVQSMRIAY TPLHGTGALHVERILGDMGFSIMTVPEQRLPDGNFPTVSSPNPEDPAALVHACAYADRVHAEVLMATDPDADRFACAVRN TRGVLQLLTGNQMGALFTDYILLTLQEQNNMPARPAIVRSVVTSPLSDRIARTYGATCVECLTGFKWICGTAEKISQSGA YSYVYGFEESYGHNFGIQVRDKDGINAAALCAEMGVYWKLRGMSLIDRLHQLFRTHGLFCEKTLNKTYAGVAGVSTMNAI MNTLRRQPLTQIARKRVMKVRDIYLGVEFSPENPAQTSALSFPQSNVLQYFVQDGSIVSIRPSGTEQKIKCYIIHPLTVS TSIEEAEQAGNMFITAVEQEMGTYLQ >Mature_586_residues MHSSQLFERARLYLEEETDPFFAQQVRDLVAQNNIAELEERFLQTLSFGTAGLRGVVGGGTNRMNPFMIKKITHAIALYL LKTFPEKAARGALRAVIAYDSRVHSRLFAHTAAHVFLAHDITAYLFSDPRPTPELSYAVQYLTCDVGIVVTASHNPPQYN GYKVYWNDGAQIAHPHEKNITEEMNAITSVVNLEEKVPVKRSAPTIIDAEIDEPYCTSIKEKLFRPGLTKETVQSMRIAY TPLHGTGALHVERILGDMGFSIMTVPEQRLPDGNFPTVSSPNPEDPAALVHACAYADRVHAEVLMATDPDADRFACAVRN TRGVLQLLTGNQMGALFTDYILLTLQEQNNMPARPAIVRSVVTSPLSDRIARTYGATCVECLTGFKWICGTAEKISQSGA YSYVYGFEESYGHNFGIQVRDKDGINAAALCAEMGVYWKLRGMSLIDRLHQLFRTHGLFCEKTLNKTYAGVAGVSTMNAI MNTLRRQPLTQIARKRVMKVRDIYLGVEFSPENPAQTSALSFPQSNVLQYFVQDGSIVSIRPSGTEQKIKCYIIHPLTVS TSIEEAEQAGNMFITAVEQEMGTYLQ
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=607, Percent_Identity=31.6309719934102, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI31377548, Length=568, Percent_Identity=32.5704225352113, Blast_Score=258, Evalue=1e-68, Organism=Escherichia coli, GI1789566, Length=162, Percent_Identity=31.4814814814815, Blast_Score=63, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71993870, Length=550, Percent_Identity=35.2727272727273, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71993878, Length=303, Percent_Identity=36.3036303630363, Blast_Score=182, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6323934, Length=585, Percent_Identity=30.5982905982906, Blast_Score=233, Evalue=4e-62, Organism=Drosophila melanogaster, GI20129809, Length=551, Percent_Identity=30.6715063520871, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24653722, Length=578, Percent_Identity=29.757785467128, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24651977, Length=448, Percent_Identity=32.3660714285714, Blast_Score=234, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 65138; Mature: 65138
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSQLFERARLYLEEETDPFFAQQVRDLVAQNNIAELEERFLQTLSFGTAGLRGVVGGG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCC TNRMNPFMIKKITHAIALYLLKTFPEKAARGALRAVIAYDSRVHSRLFAHTAAHVFLAHD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAYLFSDPRPTPELSYAVQYLTCDVGIVVTASHNPPQYNGYKVYWNDGAQIAHPHEKNI HHHEEECCCCCCCCHHHHHHEEEECCEEEEEECCCCCCCCCEEEEECCCCEECCCCCCCH TEEMNAITSVVNLEEKVPVKRSAPTIIDAEIDEPYCTSIKEKLFRPGLTKETVQSMRIAY HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHEEE TPLHGTGALHVERILGDMGFSIMTVPEQRLPDGNFPTVSSPNPEDPAALVHACAYADRVH ECCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC AEVLMATDPDADRFACAVRNTRGVLQLLTGNQMGALFTDYILLTLQEQNNMPARPAIVRS EEEEEECCCCHHHHHHHHHCCCCHHEECCCCCCHHHHHHEEEEEEECCCCCCCCHHHHHH VVTSPLSDRIARTYGATCVECLTGFKWICGTAEKISQSGAYSYVYGFEESYGHNFGIQVR HHHCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCEEEEECCHHHCCCCCCEEEE DKDGINAAALCAEMGVYWKLRGMSLIDRLHQLFRTHGLFCEKTLNKTYAGVAGVSTMNAI CCCCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MNTLRRQPLTQIARKRVMKVRDIYLGVEFSPENPAQTSALSFPQSNVLQYFVQDGSIVSI HHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCCCEEEE RPSGTEQKIKCYIIHPLTVSTSIEEAEQAGNMFITAVEQEMGTYLQ CCCCCCCEEEEEEEECEEECCCHHHHHHCCCEEEEEEHHHHCCCCC >Mature Secondary Structure MHSSQLFERARLYLEEETDPFFAQQVRDLVAQNNIAELEERFLQTLSFGTAGLRGVVGGG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCC TNRMNPFMIKKITHAIALYLLKTFPEKAARGALRAVIAYDSRVHSRLFAHTAAHVFLAHD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAYLFSDPRPTPELSYAVQYLTCDVGIVVTASHNPPQYNGYKVYWNDGAQIAHPHEKNI HHHEEECCCCCCCCHHHHHHEEEECCEEEEEECCCCCCCCCEEEEECCCCEECCCCCCCH TEEMNAITSVVNLEEKVPVKRSAPTIIDAEIDEPYCTSIKEKLFRPGLTKETVQSMRIAY HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHEEE TPLHGTGALHVERILGDMGFSIMTVPEQRLPDGNFPTVSSPNPEDPAALVHACAYADRVH ECCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC AEVLMATDPDADRFACAVRNTRGVLQLLTGNQMGALFTDYILLTLQEQNNMPARPAIVRS EEEEEECCCCHHHHHHHHHCCCCHHEECCCCCCHHHHHHEEEEEEECCCCCCCCHHHHHH VVTSPLSDRIARTYGATCVECLTGFKWICGTAEKISQSGAYSYVYGFEESYGHNFGIQVR HHHCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCEEEEECCHHHCCCCCCEEEE DKDGINAAALCAEMGVYWKLRGMSLIDRLHQLFRTHGLFCEKTLNKTYAGVAGVSTMNAI CCCCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MNTLRRQPLTQIARKRVMKVRDIYLGVEFSPENPAQTSALSFPQSNVLQYFVQDGSIVSI HHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCCCEEEE RPSGTEQKIKCYIIHPLTVSTSIEEAEQAGNMFITAVEQEMGTYLQ CCCCCCCEEEEEEEECEEECCCHHHHHHCCCEEEEEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]