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The map label for this gene is mcp4 [H]

Identifier: 189025865

GI number: 189025865

Start: 701165

End: 703009

Strand: Direct

Name: mcp4 [H]

Synonym: TPASS_0640

Alternate gene names: 189025865

Gene position: 701165-703009 (Clockwise)

Preceding gene: 189025864

Following gene: 189025867

Centisome position: 61.54

GC content: 51.54

Gene sequence:

>1845_bases
ATGAACACTGAACATGCGGTCTCCGACTTCGCCGTGCTGCGGCGCGCCGTCGTGATGAGCGTTGCGTGGGTGCCGGCGAC
TTCTCTCGTAGCCTATATCGCAGGCGTCATAGACGGGAGTATGCTCTCCGCTCTGCTCACCAGCGTCTCCTTCTTCTGTG
CGCTGGCGCTCATGCTGGGTGCTTCGCTGACGCTCTACTACGTTCTCCTCATGTCCGTTAAGAAACATCAAAACGATAGC
GCAGCTGCAGAGGCTGCGTTTCTGCGGTACACGTGGATTTCTCCCCTGCCTCCTGCAGTAGCTGCGGTGGTGTATCCGGT
GTGTGCTGCCCTAGAAGTCGGTTTTTCCTCAAGCCATGTGCTCTTGCTGTCCTACTACCTCAGCAGCGTGGGCGCAGCGC
TCTGCCTCATTCCCTTCTTTCACCATCCTTTCTTTTACACACTGCAGGAGTGGGCCCACTTTATCCCCCTGCGCGAGACA
CGCCTCGGGTACTACTCCCTCTCAAGAGAAATATCCGTCGTGCTCGTTTCAGGTTTGTTTAGTATGTTCTGCGTGGGCTT
TTCATCGCTCCTACTCCCTCTGCACGGTGAGCAGGAGCTCGCACATGTGGTTATAACCCATAACCTCCCGTGCGCGTCTT
TAATCTGCGTACTCAGCGTAATCGTCATGATCAGGATTGGCCGACACCTCGATTTAGCAAACCAAGGCATCCTCACCTTT
ATCCAAAACAGGTTGAGCGGAGATGCGTCCGCAGCGAGTATGCGCGTTGTGCGTAGAAATGAGTTTGGGTTCCTCACCCA
AAGTTTGAACAAGATGCACAAGAGCACGCGTTTCTTTCTCATTGCATCCCGTGGAAAGATGGCACGCGCTCGGAAAATCG
CGAATAGTTTTGTCAGAAATGCGCGCACTTCCTGCGCCGCTATCAACGAGATCATTTCCCAAGCACACAAGGCAGAAGAC
AAAATTAAACACCAATCCCGTACCATTTTTGAAACACAAAAGCACGTGCAGCACATTGTCGGAAACATCGATCGGTTTAA
CGGTCACATCGGCGAGCAGGTAGATACGGTAACAGATGCCGCCTCCTCCGTAGAGCAGATGGTGAGAAACATCGAGTCAG
TTACTCAGGTACTTTCGGACAATAGTAATGTCATTGAAACCCTGCTGCTTGAGGCAAAATTAGCGCAGGACGCAACTATT
CAGTCTGCAGATGTGGGAAGAGAAGTGCTTCACGCTTCAGAAGCGTTGGCTGAAGCCGGTGCGGTAATTCAGCACATCGC
AAGTCAAACTAACTTGCTTGCAATGAACGCTTCAATCGAAGCAACGTACTGTAAAGAGTCAGGTCAGGGTTTTGAAGTAG
TGGCGAGTGAGATACGTAGGCTCGCAGAGGACGCTTCGAAACAGGGAAAGCATATCTCCGCAGTGCTGCGGGACGTAAAA
ACGGAAATTGAAAAGGTTTCTGAGAGCGCGCTTGCAGTTCAGGCTCAGTTTGCGCTGATTTTCTCTATCACCACAGACAT
AAAGGCCCAAGAAGAAGTGATCAGCCAGTCGATGGTAGAACAGACGAAAGACAGTGTGCACGTGTTGCACGCTATACAGC
ACATCACCGAGATCACGCGCACGTTGCAGGAAAATTCGGGCGCCATCTTGGACAACAGCAAGCACGTAGAGGAGGCGATG
CTAGCCCTTTCGCGCATCACGTCTGAAATCGACAGCAGCGTGTCGTCCATGCACAAAAACTCAGAACAGGTTAAAAAGTA
TGCTTCCTCAATCACTGAAATCGGACAGAAGAACAAGGATTCCATAACGGACCTAGTCACTGAATTGAGCAACATGCGAC
TCTAG

Upstream 100 bases:

>100_bases
CCGTCAAGATTATCGCTTCAGAGAATAAGAATGCAATGGACATGCTTACGAACCAGCTCACCCAGCTGCGCCTGTAGTCC
ACCTTTCCATGGAGTAACCT

Downstream 100 bases:

>100_bases
AGTCGCGGGGGCGCCTGTTACCCTTCAGCTGCCATGCGTCTGCGCACTTCGTGCGCAGGTAGGCGTGTGTCCTTTCGCGT
AGAAAGGTCGCGCAGTACGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MNTEHAVSDFAVLRRAVVMSVAWVPATSLVAYIAGVIDGSMLSALLTSVSFFCALALMLGASLTLYYVLLMSVKKHQNDS
AAAEAAFLRYTWISPLPPAVAAVVYPVCAALEVGFSSSHVLLLSYYLSSVGAALCLIPFFHHPFFYTLQEWAHFIPLRET
RLGYYSLSREISVVLVSGLFSMFCVGFSSLLLPLHGEQELAHVVITHNLPCASLICVLSVIVMIRIGRHLDLANQGILTF
IQNRLSGDASAASMRVVRRNEFGFLTQSLNKMHKSTRFFLIASRGKMARARKIANSFVRNARTSCAAINEIISQAHKAED
KIKHQSRTIFETQKHVQHIVGNIDRFNGHIGEQVDTVTDAASSVEQMVRNIESVTQVLSDNSNVIETLLLEAKLAQDATI
QSADVGREVLHASEALAEAGAVIQHIASQTNLLAMNASIEATYCKESGQGFEVVASEIRRLAEDASKQGKHISAVLRDVK
TEIEKVSESALAVQAQFALIFSITTDIKAQEEVISQSMVEQTKDSVHVLHAIQHITEITRTLQENSGAILDNSKHVEEAM
LALSRITSEIDSSVSSMHKNSEQVKKYASSITEIGQKNKDSITDLVTELSNMRL

Sequences:

>Translated_614_residues
MNTEHAVSDFAVLRRAVVMSVAWVPATSLVAYIAGVIDGSMLSALLTSVSFFCALALMLGASLTLYYVLLMSVKKHQNDS
AAAEAAFLRYTWISPLPPAVAAVVYPVCAALEVGFSSSHVLLLSYYLSSVGAALCLIPFFHHPFFYTLQEWAHFIPLRET
RLGYYSLSREISVVLVSGLFSMFCVGFSSLLLPLHGEQELAHVVITHNLPCASLICVLSVIVMIRIGRHLDLANQGILTF
IQNRLSGDASAASMRVVRRNEFGFLTQSLNKMHKSTRFFLIASRGKMARARKIANSFVRNARTSCAAINEIISQAHKAED
KIKHQSRTIFETQKHVQHIVGNIDRFNGHIGEQVDTVTDAASSVEQMVRNIESVTQVLSDNSNVIETLLLEAKLAQDATI
QSADVGREVLHASEALAEAGAVIQHIASQTNLLAMNASIEATYCKESGQGFEVVASEIRRLAEDASKQGKHISAVLRDVK
TEIEKVSESALAVQAQFALIFSITTDIKAQEEVISQSMVEQTKDSVHVLHAIQHITEITRTLQENSGAILDNSKHVEEAM
LALSRITSEIDSSVSSMHKNSEQVKKYASSITEIGQKNKDSITDLVTELSNMRL
>Mature_614_residues
MNTEHAVSDFAVLRRAVVMSVAWVPATSLVAYIAGVIDGSMLSALLTSVSFFCALALMLGASLTLYYVLLMSVKKHQNDS
AAAEAAFLRYTWISPLPPAVAAVVYPVCAALEVGFSSSHVLLLSYYLSSVGAALCLIPFFHHPFFYTLQEWAHFIPLRET
RLGYYSLSREISVVLVSGLFSMFCVGFSSLLLPLHGEQELAHVVITHNLPCASLICVLSVIVMIRIGRHLDLANQGILTF
IQNRLSGDASAASMRVVRRNEFGFLTQSLNKMHKSTRFFLIASRGKMARARKIANSFVRNARTSCAAINEIISQAHKAED
KIKHQSRTIFETQKHVQHIVGNIDRFNGHIGEQVDTVTDAASSVEQMVRNIESVTQVLSDNSNVIETLLLEAKLAQDATI
QSADVGREVLHASEALAEAGAVIQHIASQTNLLAMNASIEATYCKESGQGFEVVASEIRRLAEDASKQGKHISAVLRDVK
TEIEKVSESALAVQAQFALIFSITTDIKAQEEVISQSMVEQTKDSVHVLHAIQHITEITRTLQENSGAILDNSKHVEEAM
LALSRITSEIDSSVSSMHKNSEQVKKYASSITEIGQKNKDSITDLVTELSNMRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=240, Percent_Identity=28.3333333333333, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788195, Length=250, Percent_Identity=26.8, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788194, Length=239, Percent_Identity=25.1046025104602, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI2367378, Length=142, Percent_Identity=32.3943661971831, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67271; Mature: 67271

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]