Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189025811

Identifier: 189025811

GI number: 189025811

Start: 635296

End: 636705

Strand: Direct

Name: 189025811

Synonym: TPASS_0584

Alternate gene names: NA

Gene position: 635296-636705 (Clockwise)

Preceding gene: 189025809

Following gene: 189025812

Centisome position: 55.75

GC content: 48.65

Gene sequence:

>1410_bases
ATGGAAGAACGCAAGAACTATATGGATCGGCTTGCCGAAGCACTTACGCGGCGCAAGGTGCAGCTCGATCGGGACATCCT
ACCAAAGGCGCTGGAGCAGTACCGTGTCCAGGTCACAGCGGTAAAGGCAATTCGCAGTAATTTGCTGCAAAAAGGTTTCT
TGCACGATGACGCGTACAAGTACGACAGCAAGATGACTGAGATTGAGTTGCCAGAAACTTCCCCCTACGGGGAAAATGAG
AAGCCGATGGTCATTGGTTCTCGCCTTTCGCACTATCAGACTATGCTCGGTTTTTTGGACAACTACTACCGGTTCGATTC
GGAGTTTCTAATCCCGAAACGTATTGCAAAGCTCGTTGCGCTCAACGGTACGTTCATGTGGAAAGATTTTACTGCTACCA
CCAAAGACGCGAACACACGTGGGCTATTTGACATAGTGCAATCTTTCTATGGCGCTGCTGATCCTATTTCGATAGGACTG
GTGAGGGATTCGTTGCAGTACCTAGTAAAAGCCCATGAGGTAATCAGCACAGCACTTAAGTCCCTTTCGGTGTTTCATCG
CGAGCGCTACAAATTGCTTATTCGCCAGCATGCTCTGGATGGCTTGGACGAGACAACGGTGGACGTCAACAACCCAGAGG
TTGCGCTTGACGCGATGAAAAAGAACTTTTCAGAAAATGCAAAAGGCCATCCGTTCTACAGCGAGTTGGCAACCGTGGTT
TTGAGAGAAGACTTCTCTGCCAACGCAGAAAAGCTGCGGGCTGCAATCCTCCGCGAGTTTGAAGAATCTTCTGCACCCAA
AAGATGCCGCGGTGCTATGCGCAATCCACACGCCGTACTACTTTCTGGTTTCAGATCGCTTGGAGCTACTTCTAGCCACT
TTCATACTGCTCTGGAAAAGATTCGCTTCAATGAGGAGCTCGTGACTCAGTCTGAGGCGACCTTCTTTTCAAAGGTAGTG
TTAGCCTTTCTCAAAGCTTTCAACATTCAGACGCGTTCAAAGGACGTTGAAATTGTCGTCGTCGACCCGGCAACACAGAT
ACAGAAAAAGGAATGCGTAAACGTTGAGCTCTTTCAAAAAGAGCTGGCCCGGTGTGTCAAACTGTATCGGGGTTTTGTGT
CTCCAGACACTCCGATTCATGAAAAGTTAATGGCGCTCAAGGACGAGCAGCTCTTCGAGCTCCTTTTTAAACACGTAGCA
GAGGCGCATACGCTGGTTAAACAGCTTGCAGGTCTTGATGAGTACTACAAGACAGTGAGGTCTGATGTGCGCGCGAAAAT
TAAAGGGGTCAAGATTGAAGTTACAACTATCACCACTTCTGTAACCAAGGCAAATAAGTGCCGCGCAGAATATGCCTCGC
AACTAGAGGAGCAAAAACATATGAAGCGTTTAGGGGTAGCCCGTGCGTAG

Upstream 100 bases:

>100_bases
TGTGATAGGATGCCCCCAGTTTTTTTGATTTCTTACATCCGGCTCGCAGACGGATGGGTACCATCTTTTAGAAGAGCACT
CGGCCGGTGCGGTAGGGGCT

Downstream 100 bases:

>100_bases
AATGCGGCTCTCGCGCCGCGGCATTCTCACGGTAGTAGGTACCCTTCTTCTCCTACCTCTCTTTCCTTCCGAAAAAAAAA
AGACTCACGCGCCGCTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE
KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL
VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV
LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV
LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA
EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA

Sequences:

>Translated_469_residues
MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE
KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL
VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV
LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV
LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA
EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA
>Mature_469_residues
MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE
KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL
VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV
LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV
LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA
EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53544; Mature: 53544

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YDSKMTEIELPETSPYGENEKPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVA
HCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGLVRDSLQYLVKAHEVISTALK
CCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEK
HHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
IRFNEELVTQSEATFFSKVVLAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHH
ELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVAEAHTLVKQLAGLDEYYKTVR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA
HHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
YDSKMTEIELPETSPYGENEKPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVA
HCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGLVRDSLQYLVKAHEVISTALK
CCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEK
HHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
IRFNEELVTQSEATFFSKVVLAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQK
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHH
ELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVAEAHTLVKQLAGLDEYYKTVR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA
HHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]