Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025786

Identifier: 189025786

GI number: 189025786

Start: 605616

End: 606524

Strand: Direct

Name: 189025786

Synonym: TPASS_0558

Alternate gene names: NA

Gene position: 605616-606524 (Clockwise)

Preceding gene: 189025785

Following gene: 189025787

Centisome position: 53.15

GC content: 56.55

Gene sequence:

>909_bases
ATGAAGAAAGTAGGGGTGCGCGTTCGCGCGTGTATCCTGTGCGCGCTTGCCGCGTGCGCCACAGGCGTCCTTGCTAATCC
TTTTTTTGGCGGCGCTCCCGCGCGCCCGCGGAGGCAGCGCACCCCGGAGCTTTTGCTGCGCAGATACGCGCTCGTCCATC
AACGCCTCGGTGCCGCCATAGTACAGTGGAGCAAAACCCATTCAACACGCGCGTGGTGGATTACTGTAATGCTCTCCTTT
GCGTATGGCGTTCTGCACGCCTTAGGACCAGGACACAGAAAGGCAGCGCTTTTTTCTTTCTACCTGGGGAGGAACGCACC
TGTGTGGGAACCTGCGCTCACTGCAGCGTTACTTGCGGCGTTGCATGGCGCAGCTTCCCTGCTCTTGCTTTCTGCATTTA
GAGGTGTGTCCGGTGCAATCGGTGCACACAGTGCACGCACAATGTGGTACATGGAGGTGGGTTCCTACGGACTGCTCACC
TTCTTAGCGCTTTTCTCTCTCGTGCATGAGCTGATGCACCTTTTCCCTTCGGGCGGGCGCTATTTCTCCTGCGGTTGCAG
CGCGCACACTGCCGTGTGTATGCGGACAGGAACAGTCGCCCACATGCAGTGGGGTACTATGCTCTTGAGCGGTTTATTTA
TTTGCCCTGCTGCGTTGTTTGTGATGATTCTGGTGCTCAGCTTAGATGCAGTTGGACTTGGCGTCGCAGCGGTGCTCAGT
ATTTCAGCGGGGTTAGCACTCCCCCTGATGGCTGTCGGTTATTTGGCCTGGGCGAGCCGGGCAGGTATTTTTTACCGCAT
GCAGAAGAACACTCGTCATGCACAAGCGGTGCTTTCTGTCGTGAGCATTACCTCATACGGAATTATGCTCATCGTCTGTA
CTTCAGCGCTCGTAGCTTCACTCGGTTGA

Upstream 100 bases:

>100_bases
ACGAACACTGGCGTCCCGGTCTGCATACCTACTACCCAAAAGAGATTCTCCTGCGCTACACTGCCCCCTAAGGTCCTTTT
CCAAGGGGAGTTGAGAGCGT

Downstream 100 bases:

>100_bases
AAGGAGAATGTACCTCCGCTATCTAGGTGACACTGCCTGGATAAAACCATATACCTAACACGTGGTGAACGGAAGTACGC
AGTATCTTGCACACGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAIVQWSKTHSTRAWWITVMLSF
AYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAALHGAASLLLLSAFRGVSGAIGAHSARTMWYMEVGSYGLLT
FLALFSLVHELMHLFPSGGRYFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLS
ISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVASLG

Sequences:

>Translated_302_residues
MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAIVQWSKTHSTRAWWITVMLSF
AYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAALHGAASLLLLSAFRGVSGAIGAHSARTMWYMEVGSYGLLT
FLALFSLVHELMHLFPSGGRYFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLS
ISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVASLG
>Mature_302_residues
MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAIVQWSKTHSTRAWWITVMLSF
AYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAALHGAASLLLLSAFRGVSGAIGAHSARTMWYMEVGSYGLLT
FLALFSLVHELMHLFPSGGRYFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLS
ISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVASLG

Specific function: Unknown

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32207; Mature: 32207

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VQWSKTHSTRAWWITVMLSFAYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAA
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LHGAASLLLLSAFRGVSGAIGAHSARTMWYMEVGSYGLLTFLALFSLVHELMHLFPSGGR
HHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
YFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLS
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVAS
HHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LG
CC
>Mature Secondary Structure
MKKVGVRVRACILCALAACATGVLANPFFGGAPARPRRQRTPELLLRRYALVHQRLGAAI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VQWSKTHSTRAWWITVMLSFAYGVLHALGPGHRKAALFSFYLGRNAPVWEPALTAALLAA
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LHGAASLLLLSAFRGVSGAIGAHSARTMWYMEVGSYGLLTFLALFSLVHELMHLFPSGGR
HHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
YFSCGCSAHTAVCMRTGTVAHMQWGTMLLSGLFICPAALFVMILVLSLDAVGLGVAAVLS
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAGLALPLMAVGYLAWASRAGIFYRMQKNTRHAQAVLSVVSITSYGIMLIVCTSALVAS
HHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA