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The map label for this gene is 189025751

Identifier: 189025751

GI number: 189025751

Start: 564450

End: 564929

Strand: Reverse

Name: 189025751

Synonym: TPASS_0522

Alternate gene names: NA

Gene position: 564929-564450 (Counterclockwise)

Preceding gene: 189025752

Following gene: 189025750

Centisome position: 49.58

GC content: 45.62

Gene sequence:

>480_bases
GTGACAATCAGTACCCTGGATCTCATTCTTGGAATCATCATGGGGATAGTGACCGTCCGTGCCACCATGCGCGGGTTTGT
CGATGAGTTCTTTTCTAAGGCAAGTATCCTGTGCGCAGCAGTTGTTGCAATACTGTGTCATAAAAGGCTCGTGCCCTTGA
CACGTGTGTTGTTAGGCCACAGTATTCTGCTTCCGTGTATAACGTTCTTGATTACCTTTATGGGCGTCTATTGCGTTATG
CTCTTCCTCCGTTCACGTATGCGCACGTATGCTACGCGCGATCTTATCAGTGGTTTTAATCAGGTGTTTGGCTTTTTTTT
CGGGATAATTGAAGGGAGTGTACTACTCACTGTTATCCTTTTGCTTTTACACGTGCAGCCTTTTGTATCTGTTTCGCATA
TGTTGCATGAAAGCGTAATTAACACTGTTCTCTCTCCCCTTGTCTTAGATGGCGTTCGCTATATGCGCCTGAAGATGTAG

Upstream 100 bases:

>100_bases
CTAGGATAGAGGAGATGGCACGTGCGTCTTACACACTTGGAATTGGCAATGCCGCGTATGATATTGCGCAGCAGTTGCAG
ACTTTCATAAAGGAGGGGAT

Downstream 100 bases:

>100_bases
GCGCGTTTTCGTGTTCGAGAACATTGTCGGACAGCCAGCTACTGACCTTCTGCGCGATGACGTTATGCACGCGCGTCTTC
CTGCTGCGCTCTTATTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKRLVPLTRVLLGHSILLPCITFLITFMGVYCVM
LFLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVILLLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM

Sequences:

>Translated_159_residues
MTISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKRLVPLTRVLLGHSILLPCITFLITFMGVYCVM
LFLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVILLLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM
>Mature_158_residues
TISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKRLVPLTRVLLGHSILLPCITFLITFMGVYCVML
FLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVILLLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y522_TREPA (O83534)

Other databases:

- EMBL:   AE000520
- PIR:   H71315
- RefSeq:   NP_218962.1
- ProteinModelPortal:   O83534
- IntAct:   O83534
- GeneID:   2611303
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0522
- NMPDR:   fig|243276.1.peg.521
- TIGR:   TP_0522
- HOGENOM:   HBG732045
- OMA:   RIGSADI
- ProtClustDB:   CLSK218741
- BioCyc:   TPAL243276:TP_0522-MONOMER
- InterPro:   IPR003825

Pfam domain/function: PF02674 Colicin_V

EC number: NA

Molecular weight: Translated: 17810; Mature: 17679

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x20f49d04)-; HASH(0x20788a44)-; HASH(0x1fad5688)-; HASH(0x20f7d0a8)-;

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKRLVPLTRVLLGH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILLPCITFLITFMGVYCVMLFLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
TISTLDLILGIIMGIVTVRATMRGFVDEFFSKASILCAAVVAILCHKRLVPLTRVLLGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILLPCITFLITFMGVYCVMLFLRSRMRTYATRDLISGFNQVFGFFFGIIEGSVLLTVIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLHVQPFVSVSHMLHESVINTVLSPLVLDGVRYMRLKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876