| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pgl
Identifier: 189025708
GI number: 189025708
Start: 507930
End: 508655
Strand: Reverse
Name: pgl
Synonym: TPASS_0477
Alternate gene names: 189025708
Gene position: 508655-507930 (Counterclockwise)
Preceding gene: 189025709
Following gene: 189025707
Centisome position: 44.64
GC content: 56.34
Gene sequence:
>726_bases ATGAAGAAGCATATTTTTGAGGATGCGCGTGCCATCGCGGCGTTCCTCGTTTCGGTGTTTGATTCTCGGCTCAAAACACA AGAGATTCTCTGGTTGGCCCTGTCGGGGGGTTCCACTCCAAGGGAGATTTTCAGAACTTGGGCGCACGAGTTTCGACACC ACCTTGATTGGAAGCGCCTCCGCTTCTTCTGGAGCGATGAGCGTTGCGTACCCCCCACGGATGCGCAGAGTAACTTCAAC ATGACCCATAGTGCGCTCCTTGAGCCTCTGGAAATAAATCCTGACGCGGTGTTTCGCGTCAGGGGAGAAGACGCCCCGGA GAGCGCCTGCGCCGCATACTCACAGGAAATTGAAGCACGGCTCCCAAGACAGCGTGGCGTGCCGTGCTTTGATATTATAC TCCTGGGTATGGGGGCGGATGGACACACCGCGTCTATTTTCCCTCATGAAATAGAGCTGTGGGACCACAGCGGCTGTTGC GTCGTGGCAACTCACCCAGACACCGGTCAGAAACGTGTGAGTTTCACTGGGCACCTTATCAATAATGCACACGAAATCTA CGTCGTAGTTACCGGGCGTGAAAAGCAGGACATGCTCGCGTCAGTCGCGTCAGATCCCCACGCGTCCGTGCCCTTGCACG CGTGGACACTGCCAAAGCGCAGTGGCTGCTGGATACCGCTGCTGCGGGGGCTATATCCGCGTAAGCAGTGTAAGCCAACG GTGTAG
Upstream 100 bases:
>100_bases TTCTACGCTGCTCAGCGATGATTTTGCCTGCCGACTCTAGCGGTAATGCCGAGCCTTGAACGACACTAGAACGTAGCGGG AGAGAGGAGGATGTTCGCCC
Downstream 100 bases:
>100_bases GAAAGTGGCGCATTTTGCGTGTATGCTACGGTGTCCGAGAAATTACCAAAACGGTGGAGGTGTATTATGATTATCCTCAC GCTAAACTGCGGCAGTTCAT
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: 6PGL
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFN MTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEARLPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCC VVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKRSGCWIPLLRGLYPRKQCKPT V
Sequences:
>Translated_241_residues MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFN MTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEARLPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCC VVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKRSGCWIPLLRGLYPRKQCKPT V >Mature_241_residues MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFN MTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEARLPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCC VVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKRSGCWIPLLRGLYPRKQCKPT V
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily
Homologues:
Organism=Homo sapiens, GI52145310, Length=182, Percent_Identity=36.2637362637363, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI6912586, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115533060, Length=182, Percent_Identity=29.1208791208791, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI115533058, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6321957, Length=207, Percent_Identity=27.536231884058, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324362, Length=189, Percent_Identity=24.8677248677249, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641119, Length=192, Percent_Identity=30.7291666666667, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_TREPA (O83490)
Other databases:
- EMBL: AE000520 - PIR: C71319 - RefSeq: NP_218918.1 - ProteinModelPortal: O83490 - SMR: O83490 - GeneID: 2611121 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0477 - NMPDR: fig|243276.1.peg.477 - TIGR: TP_0477 - HOGENOM: HBG725991 - OMA: PRLTFTF - ProtClustDB: CLSK2300224 - BioCyc: TPAL243276:TP_0477-MONOMER - BRENDA: 3.1.1.31 - InterPro: IPR005900 - PANTHER: PTHR11054 - TIGRFAMs: TIGR01198
Pfam domain/function: NA
EC number: =3.1.1.31
Molecular weight: Translated: 27272; Mature: 27272
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRL CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH RFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEAR HEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCCVVATHPDTGQKRVSFTGHLI CCHHCCCCHHHEEEEECCCCCCEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEHEE NNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKRSGCWIPLLRGLYPRKQCKPT CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCC V C >Mature Secondary Structure MKKHIFEDARAIAAFLVSVFDSRLKTQEILWLALSGGSTPREIFRTWAHEFRHHLDWKRL CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH RFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIEAR HEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LPRQRGVPCFDIILLGMGADGHTASIFPHEIELWDHSGCCVVATHPDTGQKRVSFTGHLI CCHHCCCCHHHEEEEECCCCCCEEEECCCEEEEECCCCCEEEEECCCCCCEEEEEEEHEE NNAHEIYVVVTGREKQDMLASVASDPHASVPLHAWTLPKRSGCWIPLLRGLYPRKQCKPT CCCEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876