| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pgi
Identifier: 189025706
GI number: 189025706
Start: 504846
End: 506453
Strand: Reverse
Name: pgi
Synonym: TPASS_0475
Alternate gene names: 189025706
Gene position: 506453-504846 (Counterclockwise)
Preceding gene: 189025707
Following gene: 189025705
Centisome position: 44.45
GC content: 53.73
Gene sequence:
>1608_bases GTGAATTGGAGAAATCTTGACGAGTGTGCCGCATACGCCCGCCTGCAGGCGATTCGTGCGCCGTCGCTGAAGACAGTACT CTGTGGACCAGAGGGGATAGAACGTGTGCGGCGCTATTGTACCGACGCGGGGGCTGGGCTGCGCTATCACTACGCAGCGA AAACAGTGAATGAAGAAATTCTCACGGCGCTTGCTGCTCTTGCAGACGAGCAGGAATTAGTCGCAAAGTACGACGCCCTG CGCGCAGGAGCACAGATAAACACGGGGGAAAAACGTAAGGTGCTGCATCACCTAACGCGCCTCGGCGTGCAGGGGTCATC GCTTGCCTCGTTGCCGTGCGAAGTGCGCGATATGCACGCCTTTTATACAAAAGAATACGAAAGAGTATGTGCGTTCGCAC GGCAAGTACACGAAGGGGGGCTGCGCACGTCTCGCGGCGCACCGTTTACCGACGTTGTACAAATTGGAATTGGTGGATCA GATCTCGGTCCACGGGCGTTGTATCTCGCGCTGGAAGGTTGGGCACAGAGGCACCAGGCGGTTAAGATGCGCACACATTT TATCTCCAACGTGGACCCAGACGACGCAGCGCTTGTACTCTCAAAACTACCGCTTGAGACCACGCTTTTTATTTTGGTAT CAAAGAGTGGTACGACGCTTGAAACACTCAGTAATGAGCTTTTCGTCGCACACGTCCTTCGTCAAGCAGGTCTAGAACCG CACACACAGTTCGTGGCAGTTACCAGCGAGACCAGTCCACTTGCAAATAATCCCCAGTACCTTGCTTCCTTCTACATGGA TGATTTTATCGGTGGACGCTACTCTAGTTCCTCTGTCTGTGGCGCTGTGGTACTCACGCTTGCGTTTGGACCGCAGGTGT TTGGGCACTTCCTCTCCGGTGCGGCAGAGGCGGACCGAGCAGCACAGGAACAAGACATACGGCGTAATGCAGCACTTCTT GACGCGCTCATCGGTGTGTACGAGCGCACTATTCTGGGATACGAGCACACCGCGGTGTTGCCCTATAGCCAGGCGTTGGC TCGCTTTCCTGCACATTTGCAACAACTAGATATGGAATCTAACGGCAAGAGTGTTAACCGCTTCGGCATTCCGATAACGT ATAAGACCGGCCCGGTGATCTTTGGAGAGCCTGGGACAAACGGTCAGCACTCGTTCTACCAACATTTGCATCAAGGAACA TCGGTGGTGCCGCTTCAGTTCATTGCCTTTCAACATAGTCAGCTCGGGCAGGATCCGATAATCCGTGGATCTACCGGTCA GCAGAAGCTCCTTGCAAATGTCGTCGCACAAATTGTCGCGTTCGCCAGGGGAAAAGAGCACGCGGATGCAAATAAAACGT TTTCCGGGGAGCGTCCATCCAGTCTGCTATACGCTAAAGCGCTTACCCCACAAACGCTCGGCGCACTTCTTGCACACTTT GAAAACAAGATTATGTTCCAAGGATTTGCGTGGAACTTGAACAGCTTTGATCAAGAAGGAGTGCAGCTGGGCAAGACGCT TGCACAACACATATTAGCAGGAGAGGTGGAAGGCGTGTTGCGCGCCTACGCAGATCTGTTTGATTTAGCACACGCGCCGA CGTGCTAG
Upstream 100 bases:
>100_bases ACTCGCGACGATTGTCGTGCCGCGTCTTGATACATAGAACAGCCGGCGATATGTCTGTAGGTAAACCCTACGGGGTAGAA CGATAAAAGGAGAACGCGCA
Downstream 100 bases:
>100_bases GTCTGTGCTTCTTAAGCCCGCGGTAATTACGCGGGCCGTGCAATATGCGCCAGCGGGACTTGGAGAAAAGCGCACACCGT GCTAGCATCAGGCGCCCGCG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEILTALAALADEQELVAKYDAL RAGAQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHAFYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGS DLGPRALYLALEGWAQRHQAVKMRTHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEP HTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSGAAEADRAAQEQDIRRNAALL DALIGVYERTILGYEHTAVLPYSQALARFPAHLQQLDMESNGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGT SVVPLQFIAFQHSQLGQDPIIRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHF ENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC
Sequences:
>Translated_535_residues MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEILTALAALADEQELVAKYDAL RAGAQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHAFYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGS DLGPRALYLALEGWAQRHQAVKMRTHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEP HTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSGAAEADRAAQEQDIRRNAALL DALIGVYERTILGYEHTAVLPYSQALARFPAHLQQLDMESNGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGT SVVPLQFIAFQHSQLGQDPIIRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHF ENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC >Mature_535_residues MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEILTALAALADEQELVAKYDAL RAGAQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHAFYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGS DLGPRALYLALEGWAQRHQAVKMRTHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEP HTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSGAAEADRAAQEQDIRRNAALL DALIGVYERTILGYEHTAVLPYSQALARFPAHLQQLDMESNGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGT SVVPLQFIAFQHSQLGQDPIIRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHF ENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=486, Percent_Identity=36.2139917695473, Blast_Score=285, Evalue=7e-77, Organism=Homo sapiens, GI296080693, Length=487, Percent_Identity=33.8809034907598, Blast_Score=244, Evalue=1e-64, Organism=Escherichia coli, GI1790457, Length=512, Percent_Identity=37.3046875, Blast_Score=287, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71996708, Length=511, Percent_Identity=35.0293542074364, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI71996703, Length=511, Percent_Identity=35.0293542074364, Blast_Score=267, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6319673, Length=541, Percent_Identity=35.6746765249538, Blast_Score=283, Evalue=4e-77, Organism=Drosophila melanogaster, GI24651916, Length=546, Percent_Identity=35.8974358974359, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI24651914, Length=546, Percent_Identity=35.8974358974359, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI17737445, Length=546, Percent_Identity=35.8974358974359, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_TREPA (O83488)
Other databases:
- EMBL: AE000520 - PIR: A71319 - RefSeq: NP_218916.1 - ProteinModelPortal: O83488 - SMR: O83488 - GeneID: 2611115 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0475 - NMPDR: fig|243276.1.peg.475 - TIGR: TP_0475 - HOGENOM: HBG352954 - OMA: GPKIVSQ - ProtClustDB: PRK14095 - BioCyc: TPAL243276:TP_0475-MONOMER - BRENDA: 5.3.1.9 - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 58419; Mature: 58419
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 359-359 ACT_SITE 390-390 ACT_SITE 505-505
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEI CCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH LTALAALADEQELVAKYDALRAGAQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHA HHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGSDLGPRALYLALEGWAQRHQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCCCCCHHEEEHHHHHHHHHHH VKMRTHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEP HHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC HTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSG CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AAEADRAAQEQDIRRNAALLDALIGVYERTILGYEHTAVLPYSQALARFPAHLQQLDMES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCC NGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGTSVVPLQFIAFQHSQLGQDPI CCCCCEEECCEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC IRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHF EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHH ENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNWRNLDECAAYARLQAIRAPSLKTVLCGPEGIERVRRYCTDAGAGLRYHYAAKTVNEEI CCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH LTALAALADEQELVAKYDALRAGAQINTGEKRKVLHHLTRLGVQGSSLASLPCEVRDMHA HHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FYTKEYERVCAFARQVHEGGLRTSRGAPFTDVVQIGIGGSDLGPRALYLALEGWAQRHQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCCCCCHHEEEHHHHHHHHHHH VKMRTHFISNVDPDDAALVLSKLPLETTLFILVSKSGTTLETLSNELFVAHVLRQAGLEP HHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC HTQFVAVTSETSPLANNPQYLASFYMDDFIGGRYSSSSVCGAVVLTLAFGPQVFGHFLSG CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AAEADRAAQEQDIRRNAALLDALIGVYERTILGYEHTAVLPYSQALARFPAHLQQLDMES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCC NGKSVNRFGIPITYKTGPVIFGEPGTNGQHSFYQHLHQGTSVVPLQFIAFQHSQLGQDPI CCCCCEEECCEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC IRGSTGQQKLLANVVAQIVAFARGKEHADANKTFSGERPSSLLYAKALTPQTLGALLAHF EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHHHHHH ENKIMFQGFAWNLNSFDQEGVQLGKTLAQHILAGEVEGVLRAYADLFDLAHAPTC CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876