Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025701

Identifier: 189025701

GI number: 189025701

Start: 498754

End: 499695

Strand: Reverse

Name: 189025701

Synonym: TPASS_0470

Alternate gene names: NA

Gene position: 499695-498754 (Counterclockwise)

Preceding gene: 189025703

Following gene: 189025700

Centisome position: 43.85

GC content: 60.3

Gene sequence:

>942_bases
ATGTGCCAAAAATCCTCACCGTGCACCTACGCACGCGTACGCTCCCTTCCATCCGTTCGCTTATTCTCCTTTCTTGCGCT
CGCATTTGCGTCCTTCCTGCGGGCAGAGGATGCCTTTGACCACTTTCGTGAAGGAGAGCGCCTCCTTTCCTTACAGCAGG
CACAGCAGGCCATCGGTCCACTTCACAAAGCAGCACAGCAAAAACCCGCCCACCCGAAAGCAGCACTCTACTTGGGAATG
GCGTACCTACAGACAGGACGCTACACGCAGGCAATCCAGTGGCTGCAAAACCCACCAGTACACAGTCAGGAATATGCGCA
CCTATACGCCTACAATCTCGGGAACGTATACTTCGTGCAACATCGCTACGAGGAAGCCCAACATGCGTATGAGCAGGCCC
TCGCCCTCAAGCACGATTACCCTCCTGCCTTGCTCAATCGCGCAAACACTGCCATGAAGCGACAAGCCTATGCACACGCA
CTGGCTGACTATAAAAAGTACGTGTCCCAAAACCCGACTGCTTCACAACACTACGAAGTGCAGCGTATGATAGCGGCGCT
TGAGCAGTGGCTGCAGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGG
AAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGG
CGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGA
GGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGTTTGAAGCTCTCAAGCGCGCGCTTAGACTGAAACAAGCGGAGGACGCGC
GTACCCTCTCCACTGGATCGGAGGACACCGTCCCCTATCAGGAGGAACACAACCTTGAATAA

Upstream 100 bases:

>100_bases
AAACGAGCAAAAAGACGATACTTGACGAGAACGCCGCTGCCAGCAGTGCCATGTACGCGGACATGCCGCCCATGGTAGCG
CACCCTAGAAGGAATGTCAA

Downstream 100 bases:

>100_bases
TGTGCACAAGACGTTCATTGCACTCGCCGCGGGGCTGGTGCTGCTTCTTGCGGTAGTTGCCGGGTTCAGTCTCTTTTCCC
GGGGGGTGGTGCGCGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM
AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA
LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR
RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE

Sequences:

>Translated_313_residues
MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM
AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA
LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR
RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE
>Mature_313_residues
MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM
AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA
LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR
RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36514; Mature: 36514

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGP
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHKAAQQKPAHPKAALYLGMAYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQ
HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHEECCCEEEHH
HRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHALADYKKYVSQNPTASQHYEV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EDTVPYQEEHNLE
CCCCCCCCCCCCC
>Mature Secondary Structure
MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGP
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHKAAQQKPAHPKAALYLGMAYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQ
HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHEECCCEEEHH
HRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHALADYKKYVSQNPTASQHYEV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EDTVPYQEEHNLE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA