Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025675

Identifier: 189025675

GI number: 189025675

Start: 471052

End: 471906

Strand: Direct

Name: 189025675

Synonym: TPASS_0443

Alternate gene names: NA

Gene position: 471052-471906 (Clockwise)

Preceding gene: 189025674

Following gene: 189025676

Centisome position: 41.34

GC content: 48.3

Gene sequence:

>855_bases
ATGCGCAGGAGTTGTTGCGCGCAGGTGCGCGGCAGAGAAGGGGGGAGTGCGGTGACTGAGGAAGAGCAGAATGCTCTGTA
CCAGAAAAAGTTGAACGTATACCAAGGGACTATTGATCAAATCTTTACGCGTGAAAAAAACATTTTAGAACTGATCAGGC
GGGATGGGACGGGCGCGGCGTACAAGAAGCTCGCGTTGGTAGATGACATGATTTACCTCAGTACGCTGTACGCTGCTAAA
TATCAGACACAGGTTGTAGTAGTAGGTGGTAAGCAGGAGGATCTGCTGAATGAGGCGCGGAAAACGCTTTATAAGGCGCT
CATCTATCTTGAAGAAATTGTTACCAATTTAATTGACGCGCCGTTTTCCGATTACCAGGAACAGGTGGCGCAGATAGCGA
ACGTAAGTCAGCAGCAGCGTTATTATCTTATCCGTAAGATGGGACTCGCCATTGATTCCATTATTAGCGCCTATGGGACG
AATACTAAATGGTATTGGTCTTTTGTAGAGCTCCAGGCGCGCTACGCAACGGTGGCGAAGAATATTCTGGATTTAGCGAA
TTCTTCTGAGATTGGATTGAATCCACAGGCTGACGAGTACGAGACAGTGGTCTATCACCTGCGTTTGGTAAAGAAATTAC
TCCTGCAGGCAGCTGAGCGTTACCGGGAAAAGTATGAGATGACGTCCTCCAGTTTTGAAGATTTTAAATTGGCTGTCTGC
TACCTGCACGCGCTGCGCAGGGTCCACCTGTTGCTCAACGAGCGACAAGATGCAGAGGAGGTAAAAAAGAAAGCAAAGGT
GTGGAGCGAGCGTATGGAAAAGGATCAGCGTAAGAGAGATCGAAGCGACAAGTAG

Upstream 100 bases:

>100_bases
CACACGAATACGAGCGCGGCGCATGTAGTGGGGGAACGACGGGTTCAAGAAGTTGCGCGCATGCTAGCAGGGGACACGCA
CAGTGCAACCTCCCTAGCGC

Downstream 100 bases:

>100_bases
GGTTAGTGCGTGCTCCTGCCGGCTGTGGAGTGTCTCGGCTGCGGGTGAACGTTTGTTATTTACGACAGGGGGAACGGGCG
CGCATAGGTGACGCTCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRRSCCAQVRGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAAYKKLALVDDMIYLSTLYAAK
YQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDAPFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGT
NTKWYWSFVELQARYATVAKNILDLANSSEIGLNPQADEYETVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVC
YLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK

Sequences:

>Translated_284_residues
MRRSCCAQVRGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAAYKKLALVDDMIYLSTLYAAK
YQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDAPFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGT
NTKWYWSFVELQARYATVAKNILDLANSSEIGLNPQADEYETVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVC
YLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK
>Mature_284_residues
MRRSCCAQVRGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAAYKKLALVDDMIYLSTLYAAK
YQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDAPFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGT
NTKWYWSFVELQARYATVAKNILDLANSSEIGLNPQADEYETVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVC
YLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33011; Mature: 33011

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSCCAQVRGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YKKLALVDDMIYLSTLYAAKYQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDA
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGTNTKWYWSFVELQARYATVAK
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NILDLANSSEIGLNPQADEYETVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVC
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRSCCAQVRGREGGSAVTEEEQNALYQKKLNVYQGTIDQIFTREKNILELIRRDGTGAA
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YKKLALVDDMIYLSTLYAAKYQTQVVVVGGKQEDLLNEARKTLYKALIYLEEIVTNLIDA
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PFSDYQEQVAQIANVSQQQRYYLIRKMGLAIDSIISAYGTNTKWYWSFVELQARYATVAK
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
NILDLANSSEIGLNPQADEYETVVYHLRLVKKLLLQAAERYREKYEMTSSSFEDFKLAVC
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLHALRRVHLLLNERQDAEEVKKKAKVWSERMEKDQRKRDRSDK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA