Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025607

Identifier: 189025607

GI number: 189025607

Start: 398975

End: 401350

Strand: Direct

Name: 189025607

Synonym: TPASS_0374

Alternate gene names: NA

Gene position: 398975-401350 (Clockwise)

Preceding gene: 189025606

Following gene: 189025608

Centisome position: 35.01

GC content: 54.29

Gene sequence:

>2376_bases
GTGCGCTCTATGGCGCAGCACTTGGTTACCAAAATCGTTACGCGGAGAGGACTCCTCATGAGTAAGGGAATGTGCCCACG
TATGGGAAGACTCTGTGCAGTGAGTATCTTTTGTGCATTTTCTGGCATCCAAGATGCCTCGTGCGTGTCTGAACCTGCAC
CTCCACAGGATTTAGAACGTAATCATCCAGGTGTTGCGGCTCGGTATCTGCAGGAAGGGCGATGGCAGGAAGCTTTGTCC
CAGGCAGAGCAGGGAGTCGCTTCTGCTCCGCAAATAGCAGACTTTTTATTTATTGCTGCACGGGCTTCTTACGCGCTGCA
GCAGCCGCGCGCACGTGCGTTACAGTGGATGGCCCGTGCCGTGGCAAAGGATATGCAATGGTGTGTGTACGATATAGAAG
AGGTGCGGCTTTTTTATGCTCGTCTGTGTGTGGATACGTTGCAGCACGCCCGTGCACTGGAACTTCTTGCAACGGCTGAG
CAGGTGTCTGCAGATGCAGATTGGTTGCGTGCCCGGGCACGTTACGGGCTCGGACAAGTTGAGCACGCGCAGGAGCTGAT
CGAAAAAGCGTTGGAACGTTGGGCGCTTGACGCGCGCTTTGCAAAGTTGTTTTTTGCGCAAGAGCGTTCACGACGTCCCT
CGTCGCGGTCAAAAAAGATAGCAGATTCCATCCTGTCACGTCTTTCTGTATGGCAGGAGCAGGACCCATCGCTGCTTGTA
GAGGCGGCTCTATTTGAACCTCGAACGAACATGGCATTTCGATATCTGCAAACGTATTTTACCTTGCGTCCGTTAGATGC
TCCTGGAGAGAGTTCTGCTCAATCCTCATATGAGCAAAGCACGCGCGCAGGGGATTCTGCTCCTGAGCAGGAGCTGTACG
CGCGTGCCCAGTCAATTGTGTTGGGATTGCAGTATGGAGTGCTGGATGAACAACGCGCGATGGAGATGTTCTGTACGCTG
AATTCCCCTCTGGCAGTTCCTGCGGTTGACCCGACCGATGATGTTTCAAGCTTCGGTGTGCATGCGTCGTCTGTGTCTTC
ATCCACTCCCTTGCAGCGCGTGGTGGTTTTGTATGCGGATCTGCTGCATGAGTTCAGTCGTTTGCTTGCAAGTCGGCCGA
TTCGCGCACGTTTTGCGCGGTTTCTTGCGGAGTTCGAAGGTGTGTTGTATACCGATGAAAATCGGGACGGCATTGTTTCT
GCGCGTGTGTTTTTTAAAGCAGGAAGGCCGAGCCGGGCACAGTTCGATACAAACCAGGATGGCATCCTCGAGTATGAAGT
CTATGCGAATGACGGTGCGCCAACGTGCGTGCACACGATGCACAGTACGCAAAAGACGGAATTGTCGCGCGCTTCTGTGT
TCCCCATACCCCAGAATATTGCCGCGCACGACCATGAGCGTGCTGCTGAGCGCTGGATTGCCCCGCGCGTGTCGCTTCCT
GCAGATAATGGGGTGGAGGGAGAAACTCAGGCGCGTGTTCCTTTGACGCAGCAAGGCTACAGAGTGTGTTACGATCGCTA
CCCTGAAGTACACCAGGTGGGGTGGGAGGATAAAACGTACGTATTGCGTCCTCGTGCACTTCGGTGGCAGCCGGTACGCA
TGCAGTCCTTAGATCTTGCGCGAGATTTAGAAGGTGTGCGGTCGCACGATTTTTTCACAATGGTATTGACAAATGAGCCG
CTCCCTACTGAGCAGCAGATCACAGTTTCTTCCCTTTATTACGAAAAGCCTGATTCCCTGTTTGAGCGTGCCCGCGTAAG
GACGTACCTTGATGAAGGGCTGCCTTTATTTTCTGAAACTCATGTTGGATCGCGTTTTCGTGCGCGTACGCACTATGTGG
ATGGACGCGCAACGCGACGGGATAGCGATCGGGATGATGATGGATTTTTTGAAACGCGGGAATACTACAATGCTCAAGGG
GCGGTACGTGCGTTGTCAGTTGACGTGCACAAGGATCGAAGTTTTGCCTATCAAGAAGAGTATGGAGCGAAGGGACAGAA
GGTGCAAAAATGGTATGGCCGTGGACGTGTGACGATTTCGCACACAGAACTACCTACCGGTCATGCGCGTACTGAGTGGT
TGCACCCGGTGACAGGTAGGCACGTGACAGTAGATTTTGTGCAGGGGGTGCCTAAAAGGCTGCTAGTGGATGGGGAGGTG
CACGCGCTTACCAAAGACCCGCGTAACGCTGCGTTATATTGGGTGCGGCGGATCCCGCGGAACGGGGACGAAGTGGGACA
AAGAATAGTTGAATCTTTCCGCGCGGCGACCTCACCGGTGGTGTCCGAGTATTTCAGGACGGGTGGGAGCGTGGTGCGAG
CGGTCCGCTCCGGAGGAGTTGTCTTCGCCGAGGAGCTTGAACCAGGGAAGGAGTAG

Upstream 100 bases:

>100_bases
CGCGGTGGTCATAAGGGGATCCGAAAGATGTTCTCAGAGTGGCACGTACCTTTATCGGACCGCACGGTGTTACCGATGAT
AGAGCAGGATGGTGTGTTGC

Downstream 100 bases:

>100_bases
GGCCCGGCGATCCCTCTGCTGGGGACTCAGTCCGGTGCGATCACGATTTGCCAGTTTCGATATAACTGTAGGGGTGTACT
TTGAAATGCCGAAGTAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS
QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE
QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV
EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL
NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS
ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP
ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP
LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG
AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV
HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE

Sequences:

>Translated_791_residues
MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS
QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE
QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV
EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL
NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS
ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP
ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP
LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG
AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV
HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE
>Mature_791_residues
MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS
QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE
QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV
EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL
NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS
ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP
ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP
LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG
AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV
HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y374_TREPA (O83389)

Other databases:

- EMBL:   AE000520
- PIR:   E71333
- RefSeq:   NP_218814.1
- ProteinModelPortal:   O83389
- IntAct:   O83389
- GeneID:   2611260
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0374
- NMPDR:   fig|243276.1.peg.373
- TIGR:   TP_0374
- HOGENOM:   HBG731989
- OMA:   FETRIEY
- ProtClustDB:   CLSK218668
- BioCyc:   TPAL243276:TP_0374-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89453; Mature: 89453

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLER
CCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCC
NHPGVAARYLQEGRWQEALSQAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARA
CCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
VAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAEQVSADADWLRARARYGLGQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
EHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIV
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGLQYGVLDEQRAMEMFCTLNSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYAD
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHH
LLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVSARVFFKAGRPSRAQFDTNQD
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC
GILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP
CEEEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC
ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
RDLEGVRSHDFFTMVLTNEPLPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSET
HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHC
HVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQGAVRALSVDVHKDRSFAYQEE
CCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCHHHHHH
YGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV
HCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEHHHCCCCHHEEECCCE
HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGV
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCE
VFAEELEPGKE
EEEECCCCCCC
>Mature Secondary Structure
MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLER
CCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCC
NHPGVAARYLQEGRWQEALSQAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARA
CCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
VAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAEQVSADADWLRARARYGLGQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
EHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIV
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGLQYGVLDEQRAMEMFCTLNSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYAD
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHH
LLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVSARVFFKAGRPSRAQFDTNQD
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC
GILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP
CEEEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC
ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH
RDLEGVRSHDFFTMVLTNEPLPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSET
HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHC
HVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQGAVRALSVDVHKDRSFAYQEE
CCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCHHHHHH
YGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV
HCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEHHHCCCCHHEEECCCE
HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGV
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCE
VFAEELEPGKE
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876