| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025607
Identifier: 189025607
GI number: 189025607
Start: 398975
End: 401350
Strand: Direct
Name: 189025607
Synonym: TPASS_0374
Alternate gene names: NA
Gene position: 398975-401350 (Clockwise)
Preceding gene: 189025606
Following gene: 189025608
Centisome position: 35.01
GC content: 54.29
Gene sequence:
>2376_bases GTGCGCTCTATGGCGCAGCACTTGGTTACCAAAATCGTTACGCGGAGAGGACTCCTCATGAGTAAGGGAATGTGCCCACG TATGGGAAGACTCTGTGCAGTGAGTATCTTTTGTGCATTTTCTGGCATCCAAGATGCCTCGTGCGTGTCTGAACCTGCAC CTCCACAGGATTTAGAACGTAATCATCCAGGTGTTGCGGCTCGGTATCTGCAGGAAGGGCGATGGCAGGAAGCTTTGTCC CAGGCAGAGCAGGGAGTCGCTTCTGCTCCGCAAATAGCAGACTTTTTATTTATTGCTGCACGGGCTTCTTACGCGCTGCA GCAGCCGCGCGCACGTGCGTTACAGTGGATGGCCCGTGCCGTGGCAAAGGATATGCAATGGTGTGTGTACGATATAGAAG AGGTGCGGCTTTTTTATGCTCGTCTGTGTGTGGATACGTTGCAGCACGCCCGTGCACTGGAACTTCTTGCAACGGCTGAG CAGGTGTCTGCAGATGCAGATTGGTTGCGTGCCCGGGCACGTTACGGGCTCGGACAAGTTGAGCACGCGCAGGAGCTGAT CGAAAAAGCGTTGGAACGTTGGGCGCTTGACGCGCGCTTTGCAAAGTTGTTTTTTGCGCAAGAGCGTTCACGACGTCCCT CGTCGCGGTCAAAAAAGATAGCAGATTCCATCCTGTCACGTCTTTCTGTATGGCAGGAGCAGGACCCATCGCTGCTTGTA GAGGCGGCTCTATTTGAACCTCGAACGAACATGGCATTTCGATATCTGCAAACGTATTTTACCTTGCGTCCGTTAGATGC TCCTGGAGAGAGTTCTGCTCAATCCTCATATGAGCAAAGCACGCGCGCAGGGGATTCTGCTCCTGAGCAGGAGCTGTACG CGCGTGCCCAGTCAATTGTGTTGGGATTGCAGTATGGAGTGCTGGATGAACAACGCGCGATGGAGATGTTCTGTACGCTG AATTCCCCTCTGGCAGTTCCTGCGGTTGACCCGACCGATGATGTTTCAAGCTTCGGTGTGCATGCGTCGTCTGTGTCTTC ATCCACTCCCTTGCAGCGCGTGGTGGTTTTGTATGCGGATCTGCTGCATGAGTTCAGTCGTTTGCTTGCAAGTCGGCCGA TTCGCGCACGTTTTGCGCGGTTTCTTGCGGAGTTCGAAGGTGTGTTGTATACCGATGAAAATCGGGACGGCATTGTTTCT GCGCGTGTGTTTTTTAAAGCAGGAAGGCCGAGCCGGGCACAGTTCGATACAAACCAGGATGGCATCCTCGAGTATGAAGT CTATGCGAATGACGGTGCGCCAACGTGCGTGCACACGATGCACAGTACGCAAAAGACGGAATTGTCGCGCGCTTCTGTGT TCCCCATACCCCAGAATATTGCCGCGCACGACCATGAGCGTGCTGCTGAGCGCTGGATTGCCCCGCGCGTGTCGCTTCCT GCAGATAATGGGGTGGAGGGAGAAACTCAGGCGCGTGTTCCTTTGACGCAGCAAGGCTACAGAGTGTGTTACGATCGCTA CCCTGAAGTACACCAGGTGGGGTGGGAGGATAAAACGTACGTATTGCGTCCTCGTGCACTTCGGTGGCAGCCGGTACGCA TGCAGTCCTTAGATCTTGCGCGAGATTTAGAAGGTGTGCGGTCGCACGATTTTTTCACAATGGTATTGACAAATGAGCCG CTCCCTACTGAGCAGCAGATCACAGTTTCTTCCCTTTATTACGAAAAGCCTGATTCCCTGTTTGAGCGTGCCCGCGTAAG GACGTACCTTGATGAAGGGCTGCCTTTATTTTCTGAAACTCATGTTGGATCGCGTTTTCGTGCGCGTACGCACTATGTGG ATGGACGCGCAACGCGACGGGATAGCGATCGGGATGATGATGGATTTTTTGAAACGCGGGAATACTACAATGCTCAAGGG GCGGTACGTGCGTTGTCAGTTGACGTGCACAAGGATCGAAGTTTTGCCTATCAAGAAGAGTATGGAGCGAAGGGACAGAA GGTGCAAAAATGGTATGGCCGTGGACGTGTGACGATTTCGCACACAGAACTACCTACCGGTCATGCGCGTACTGAGTGGT TGCACCCGGTGACAGGTAGGCACGTGACAGTAGATTTTGTGCAGGGGGTGCCTAAAAGGCTGCTAGTGGATGGGGAGGTG CACGCGCTTACCAAAGACCCGCGTAACGCTGCGTTATATTGGGTGCGGCGGATCCCGCGGAACGGGGACGAAGTGGGACA AAGAATAGTTGAATCTTTCCGCGCGGCGACCTCACCGGTGGTGTCCGAGTATTTCAGGACGGGTGGGAGCGTGGTGCGAG CGGTCCGCTCCGGAGGAGTTGTCTTCGCCGAGGAGCTTGAACCAGGGAAGGAGTAG
Upstream 100 bases:
>100_bases CGCGGTGGTCATAAGGGGATCCGAAAGATGTTCTCAGAGTGGCACGTACCTTTATCGGACCGCACGGTGTTACCGATGAT AGAGCAGGATGGTGTGTTGC
Downstream 100 bases:
>100_bases GGCCCGGCGATCCCTCTGCTGGGGACTCAGTCCGGTGCGATCACGATTTGCCAGTTTCGATATAACTGTAGGGGTGTACT TTGAAATGCCGAAGTAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE
Sequences:
>Translated_791_residues MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE >Mature_791_residues MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLERNHPGVAARYLQEGRWQEALS QAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARAVAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAE QVSADADWLRARARYGLGQVEHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIVLGLQYGVLDEQRAMEMFCTL NSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYADLLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVS ARVFFKAGRPSRAQFDTNQDGILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLARDLEGVRSHDFFTMVLTNEP LPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSETHVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQG AVRALSVDVHKDRSFAYQEEYGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGVVFAEELEPGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y374_TREPA (O83389)
Other databases:
- EMBL: AE000520 - PIR: E71333 - RefSeq: NP_218814.1 - ProteinModelPortal: O83389 - IntAct: O83389 - GeneID: 2611260 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0374 - NMPDR: fig|243276.1.peg.373 - TIGR: TP_0374 - HOGENOM: HBG731989 - OMA: FETRIEY - ProtClustDB: CLSK218668 - BioCyc: TPAL243276:TP_0374-MONOMER - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89453; Mature: 89453
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLER CCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCC NHPGVAARYLQEGRWQEALSQAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARA CCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH VAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAEQVSADADWLRARARYGLGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH EHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIV HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LGLQYGVLDEQRAMEMFCTLNSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYAD HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHH LLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVSARVFFKAGRPSRAQFDTNQD HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC GILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP CEEEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLA CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH RDLEGVRSHDFFTMVLTNEPLPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSET HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHC HVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQGAVRALSVDVHKDRSFAYQEE CCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCHHHHHH YGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV HCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEHHHCCCCHHEEECCCE HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGV EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCE VFAEELEPGKE EEEECCCCCCC >Mature Secondary Structure MRSMAQHLVTKIVTRRGLLMSKGMCPRMGRLCAVSIFCAFSGIQDASCVSEPAPPQDLER CCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCC NHPGVAARYLQEGRWQEALSQAEQGVASAPQIADFLFIAARASYALQQPRARALQWMARA CCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH VAKDMQWCVYDIEEVRLFYARLCVDTLQHARALELLATAEQVSADADWLRARARYGLGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH EHAQELIEKALERWALDARFAKLFFAQERSRRPSSRSKKIADSILSRLSVWQEQDPSLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH EAALFEPRTNMAFRYLQTYFTLRPLDAPGESSAQSSYEQSTRAGDSAPEQELYARAQSIV HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LGLQYGVLDEQRAMEMFCTLNSPLAVPAVDPTDDVSSFGVHASSVSSSTPLQRVVVLYAD HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCHHHHHHHHHHH LLHEFSRLLASRPIRARFARFLAEFEGVLYTDENRDGIVSARVFFKAGRPSRAQFDTNQD HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCC GILEYEVYANDGAPTCVHTMHSTQKTELSRASVFPIPQNIAAHDHERAAERWIAPRVSLP CEEEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHCCCHHHHHHHHCCCCCCCC ADNGVEGETQARVPLTQQGYRVCYDRYPEVHQVGWEDKTYVLRPRALRWQPVRMQSLDLA CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHH RDLEGVRSHDFFTMVLTNEPLPTEQQITVSSLYYEKPDSLFERARVRTYLDEGLPLFSET HHHHHHCCCCEEEEEEECCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHC HVGSRFRARTHYVDGRATRRDSDRDDDGFFETREYYNAQGAVRALSVDVHKDRSFAYQEE CCCCHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCHHHHHH YGAKGQKVQKWYGRGRVTISHTELPTGHARTEWLHPVTGRHVTVDFVQGVPKRLLVDGEV HCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEHHHCCCCHHEEECCCE HALTKDPRNAALYWVRRIPRNGDEVGQRIVESFRAATSPVVSEYFRTGGSVVRAVRSGGV EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCE VFAEELEPGKE EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876