| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025608
Identifier: 189025608
GI number: 189025608
Start: 401508
End: 401717
Strand: Direct
Name: 189025608
Synonym: TPASS_0375
Alternate gene names: NA
Gene position: 401508-401717 (Clockwise)
Preceding gene: 189025607
Following gene: 189025610
Centisome position: 35.24
GC content: 50.0
Gene sequence:
>210_bases ATGGCATCCGTTTTTTCCTTTTTACTCATGAGCGCTGCAGGTTTTCCTACTCTTTCTACAGACTCTTCTATCAGGTCGTC GAGGAACGCACTGACGCTCTTAAGGTGGATATGCGAGGCGGTCTCCGCAGCAGTGCCGGTGAGCCGGCCAAGCGCAAACT GCGTAACCTACAAAGCAGTAATATCAAAGTTTATCGCTAGAATCGCCTGA
Upstream 100 bases:
>100_bases CGATATAACTGTAGGGGTGTACTTTGAAATGCCGAAGTAGTGGGAGACCCTGTCTTCCGCGCGTGTAATGAGAAACGCCC CTATCTGGCTGAGAAAGTGG
Downstream 100 bases:
>100_bases GCCGTGCTATGTTCGTCACGAATATACAACATGCTCGACTTAAGGGAGCGGCAGTTCTCCGTGCGAATGAGGTAGTTGAG CCGCCCTTGCCTGTTTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MASVFSFLLMSAAGFPTLSTDSSIRSSRNALTLLRWICEAVSAAVPVSRPSANCVTYKAVISKFIARIA
Sequences:
>Translated_69_residues MASVFSFLLMSAAGFPTLSTDSSIRSSRNALTLLRWICEAVSAAVPVSRPSANCVTYKAVISKFIARIA >Mature_68_residues ASVFSFLLMSAAGFPTLSTDSSIRSSRNALTLLRWICEAVSAAVPVSRPSANCVTYKAVISKFIARIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y375_TREPA (O83390)
Other databases:
- EMBL: AE000520 - PIR: A71330 - RefSeq: NP_218815.1 - ProteinModelPortal: O83390 - IntAct: O83390 - GeneID: 2611261 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0375 - NMPDR: fig|243276.1.peg.374 - TIGR: TP_0375 - HOGENOM: HBG250956 - ProtClustDB: CLSK2300202 - BioCyc: TPAL243276:TP_0375-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7354; Mature: 7222
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVFSFLLMSAAGFPTLSTDSSIRSSRNALTLLRWICEAVSAAVPVSRPSANCVTYKAV CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ISKFIARIA HHHHHHHCC >Mature Secondary Structure ASVFSFLLMSAAGFPTLSTDSSIRSSRNALTLLRWICEAVSAAVPVSRPSANCVTYKAV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ISKFIARIA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876