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The map label for this gene is ctp [H]

Identifier: 189025511

GI number: 189025511

Start: 293778

End: 295124

Strand: Reverse

Name: ctp [H]

Synonym: TPASS_0277

Alternate gene names: 189025511

Gene position: 295124-293778 (Counterclockwise)

Preceding gene: 189025537

Following gene: 189025510

Centisome position: 25.9

GC content: 50.48

Gene sequence:

>1347_bases
ATGCAGACGGTGCAGGATGTCTACGAATTCCTCCGCAAATACTACGTCGACGAGGTAGACCCCCACATCCTCTACAAGGG
GGCACTAGAAGGCATGATTAACTCTCTTCAGGACCCTTACACAACCTTCGTCGAAAGCGACAGCATCAGCGGCGTTAATC
TCCAAGACACTACCAAGGGTTTCTTTGGCGGCATCGGCGTTGTCATTTCTAAGTCCAGAACATCCACTCCGGGCAAACCC
GCCTACGTGGAAGTGACCGCCGCCATTGAAGACACTCCTTCCTGGAAAGGAGGAATCAGACCGAGGGACCTCATCGTCAA
AATCGGCACCATGAGCACTGACACCATGACTATGGACGAGGTTTTAAAGAAACTACGGGGGCCGATAGGCACCAAGGTGA
CTCTTGTTGTCAAACGGGGTACAAAGATTTTCCGACCATTCACCCTCACCCGTGCGAAAATTGAAATTCCCACTGTTAAG
TACGCAAAAATCGATCCAAACATCGCGTACGTGCGCCTCATAGAGTTCAACCCAGTCACCGCTACCCGCATGGTAGAAAC
CGTTACCGAACTGCGTAGGCAAGGTTGCGACCGTCTCATTCTCGACCTGCGCAACAATCCAGGCGGCCTTATCACCGCCG
CAGTGGACGTTACCAGCTCATTCATTCCCTCCGGAACCGTTGTAACCACTAAGTCACGCGTGCAGGGACACTCCATAACG
TTCAGCGTTAACGCACGTGCGCAGAAGCTACCTCCGTCTATGCCTGTGATTGTTCTCATCAACAGGGATTCTGCGTCCGC
TTCAGAAATCGTTTCAGGTGCGCTAAAAGACCACAAGCGCGCATATCTGGTCGGCCAAACCACATACGGAAAGGGAGTCG
TGCAGCAAGTCTTTGACCTCAATGAACGGGAGAGTTTGAAAATGACTATCTCACGCTACTACACCCCAAGCGACGCAAAT
ATCGATAAGAGCGGCATTCCGCCGGACCTCGAGGTACGAGAAACAGAGTTTACTCCCGAGGAAGAAGAGGCACTTGTCAG
TCTATTTAAGTCTGAAAAAGTGAAACTCTTTGCAGAGCAGAACCGTACCATGAACTCCGAACGCATAAAACAGTATGCAC
GTGGCCTGGCACGCGAATTTAAACTCCGATCAATACTGGTGGAAAAGCTCATCGCACAGGAGTATCACCGGCACAATGCG
TCTTTTGTATATGACTTAGAATATGATGAACAGCTGCGAAAGGCGGTGGAGTTGATACGCACACAGGATATTCACGCGCT
GGTGGCGCGTACTAAAACGGTCAAAGAATTGCAAGAGGGAATACAGGAAAAAAAGAAGGTATCTTGA

Upstream 100 bases:

>100_bases
GACTGTTTGCGCTCCTCGTCTGTTGTCTGATCACCAGCGCACTCCCTTCCCCACATGGACTGCCGCTTATTTGCCACAGT
CTTCCGAGGAAGACGAGCGC

Downstream 100 bases:

>100_bases
ACGTCCAGTTCGCTACGCGTGCGCCCTTGTTATACCCCTTGCAAAGACTTGGTGAGTGTGGCCCTTATCAGGTCGGTCCC
GCTGCCCAGGCTATGGGAGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKGFFGGIGVVISKSRTSTPGKP
AYVEVTAAIEDTPSWKGGIRPRDLIVKIGTMSTDTMTMDEVLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVK
YAKIDPNIAYVRLIEFNPVTATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSIT
FSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDLNERESLKMTISRYYTPSDAN
IDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQNRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNA
SFVYDLEYDEQLRKAVELIRTQDIHALVARTKTVKELQEGIQEKKKVS

Sequences:

>Translated_448_residues
MQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKGFFGGIGVVISKSRTSTPGKP
AYVEVTAAIEDTPSWKGGIRPRDLIVKIGTMSTDTMTMDEVLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVK
YAKIDPNIAYVRLIEFNPVTATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSIT
FSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDLNERESLKMTISRYYTPSDAN
IDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQNRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNA
SFVYDLEYDEQLRKAVELIRTQDIHALVARTKTVKELQEGIQEKKKVS
>Mature_448_residues
MQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKGFFGGIGVVISKSRTSTPGKP
AYVEVTAAIEDTPSWKGGIRPRDLIVKIGTMSTDTMTMDEVLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVK
YAKIDPNIAYVRLIEFNPVTATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSIT
FSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDLNERESLKMTISRYYTPSDAN
IDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQNRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNA
SFVYDLEYDEQLRKAVELIRTQDIHALVARTKTVKELQEGIQEKKKVS

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=326, Percent_Identity=28.5276073619632, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50317; Mature: 50317

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHH
FFGGIGVVISKSRTSTPGKPAYVEVTAAIEDTPSWKGGIRPRDLIVKIGTMSTDTMTMDE
HHCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
VLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVKYAKIDPNIAYVRLIEFNPVT
HHHHHCCCCCCEEEEEEECCCEEECCEEEEEEEEECCCEEEEEECCCEEEEEEEEECCCH
ATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSIT
HHHHHHHHHHHHHCCCCEEEHEECCCCCCEEEEEEEHHHHHCCCCCEEEEHHHCCCCEEE
FSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDL
EEECCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCC
NERESLKMTISRYYTPSDANIDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQ
CCCHHHEEEEEHEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECC
NRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNASFVYDLEYDEQLRKAVELIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
TQDIHALVARTKTVKELQEGIQEKKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTVQDVYEFLRKYYVDEVDPHILYKGALEGMINSLQDPYTTFVESDSISGVNLQDTTKG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHH
FFGGIGVVISKSRTSTPGKPAYVEVTAAIEDTPSWKGGIRPRDLIVKIGTMSTDTMTMDE
HHCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
VLKKLRGPIGTKVTLVVKRGTKIFRPFTLTRAKIEIPTVKYAKIDPNIAYVRLIEFNPVT
HHHHHCCCCCCEEEEEEECCCEEECCEEEEEEEEECCCEEEEEECCCEEEEEEEEECCCH
ATRMVETVTELRRQGCDRLILDLRNNPGGLITAAVDVTSSFIPSGTVVTTKSRVQGHSIT
HHHHHHHHHHHHHCCCCEEEHEECCCCCCEEEEEEEHHHHHCCCCCEEEEHHHCCCCEEE
FSVNARAQKLPPSMPVIVLINRDSASASEIVSGALKDHKRAYLVGQTTYGKGVVQQVFDL
EEECCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCC
NERESLKMTISRYYTPSDANIDKSGIPPDLEVRETEFTPEEEEALVSLFKSEKVKLFAEQ
CCCHHHEEEEEHEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECC
NRTMNSERIKQYARGLAREFKLRSILVEKLIAQEYHRHNASFVYDLEYDEQLRKAVELIR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH
TQDIHALVARTKTVKELQEGIQEKKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]