| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is mutL [H]
Identifier: 189025537
GI number: 189025537
Start: 317150
End: 319096
Strand: Reverse
Name: mutL [H]
Synonym: TPASS_0303
Alternate gene names: 189025537
Gene position: 319096-317150 (Counterclockwise)
Preceding gene: 189025538
Following gene: 189025511
Centisome position: 28.0
GC content: 57.52
Gene sequence:
>1947_bases GTGGCGTGTGCAAAGCGCGCTACGGGGGCAGCGCTTCGGCAAAACGCGGGAGCTGGCTGTCTACGCTCTGGCAAGGGTTT TTCTATGCATGAAACGTCCTACAAACCTATCCACCGGCTGTCCCCTGACACCGCTAAAAAAATCGCCGCAGGAGAAGTCA TCGAGCGGCCCGCCTCCGTCGTGCGCGAATTGCTCGAGAACGCACTCGATGCAGGCGCCACCAAAATCCATCTGGAAATT AACGCAGGCGGCTGCGCGCTCATCCGCGTGAGCGATAACGGCCACGGCATGTCCCCCCAGGATTTGTTGCTATGCGCTGA AGCACACACCACGAGCAAAATATCGTCTGCAGACGACTTATTGCAGCTGCGCACGTTAGGCTTCCGGGGAGAAGCACTCG CCTCCATCGCCGCAGTCAGCCGCCTGCACCTTACGAGCACCCGATCAGGGCCCCTCGCGTGGCACTACCAGCCAAAGGCT GCAGGCACTGCAGCGCACGTACCGCCGGTGCCGCAGGGCACCGAAGCAGGCGTGCTAGAGCCTGCAAGTCTTGAGCGAGG CACCGTCGTACGCGTCGAGCAGCTTTTTGAAAACTTTCCTGCGCGCAAACGCTTTCTCGGACGCCAAAGCGCAGAGACCA CCCTGTGCCGCAGCGCACTCATCGACGTCTCCCTCGCACATCACCCCGTGGAGTTTCGCTTCACCGTCGACGGAACGCAC AAGCTCACCCTGCTCAGTCAGCAAACCCGGAAGGATCGGTGTCTTGAAACGCAAATGCTCAAAGGAGATCCTGCGCTCTT CCACACCATAGAAGGAGGTGACTGCTCGTTTCACTTTCACCTTGTACTTTCAGAACCCGCCATCTGCCGCAGAGAACGCC GCGGTATTTTTACCTTCGTCAACGGACGACGCATTTTTGATTACGGTCTTGTCCAGGCACTTGTGTTAGGAAGCGAGGGA TACTTCCCCAATGGCACCTTTCCGGTCGCCTGCCTTTTCCTCACCGTTAACAGCGAACGTATTGATTTTAATATCCACCC TGCCAAAAAGGAGGTTCACTTACAGGACTATGCTCACATCCGCCACACACTCAGCCGCAGCGTTGCGCACTTCTACCGTC AGTGCACTATTGCTCACTACGTACGTGCAGAACCTGCCCACGCACCTGCCACTCAGGGCAACGCGCCAACACATTCCTCA CCCCCCTGCACCGGCGTACGAGAAGAACCCGCCGCTCCCTGCGCGCACACACCCCGGTACGAATCCCTGTTCCCTCTACC CGTGCAGCATGCGCACCTGCTTCCTCCGTCACCTCCTCACATCTCGTGCGAACACGCGCGCGATTGCACTCACCCAGCCC CCGCTGCCGAAGGAGATGCGCCTGTGCACAACCATACCCATACAGGTGCATTCAAAGTACTCGGACAGGTAGCAGGAACA TTCATCGCCGTAGAACGCAACAACGCTCTCTACCTTATCGATCAGCACGCAGCACATGAACGCATTATTTTTGATACGCT ACAGCGGAACCTTGGCACTGCACAAATACTTCTTATTCCCTACCACATTCACCCACGCTCGGATGAAGAGGCGCGCATCA TGCACCGCGCCTGCACAGAACTTTCTCCTGCAGGATTTCGATTTCACGAAGAACCAGACGGTTCGTGGCACGTAACTGCG GTGCCGCTCCACTGGCGGGGGAGCGAAGAGCAACTTGCACACGATATCCTCTACTCAGGAAAAAACGCGCACGACATCCT GCGCCACGTCCTCGCTACCTGTGCCTGCCGGTCTGCGTGTAAAGACGGCACCATCCTGGATGACGCAACGCTCCACTCGT TAGTGGAGCAGGCTTTTGCATTACCACAATCGAGGTGTCCCCACGGACGGCCCATTTGGATTGTCATTGGCCGAGACGAA TTGTTCAAACGGATCAAGCGCACGTAA
Upstream 100 bases:
>100_bases GGCCGGGGTTCAGTACGGCTTCCAACTTGCAGAGACGCAGAGCGCCACAACCCCCGGTTTCAGCCCGATTTTTTCCATGG CCTTGTAGGAAGGTTCCCCC
Downstream 100 bases:
>100_bases CGCGCTGCAGATACGCAAAAAGAAGCCTGCTACGTCTGCGCTCTCCGCGTCGGCACGGGGAGGTGCGCCGTGTGCACACA AACACCACCAGTGAGAGGAT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEI NAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKA AGTAAHVPPVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTH KLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEG YFPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSS PPCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGT FIAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFRFHEEPDGSWHVTA VPLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDE LFKRIKRT
Sequences:
>Translated_648_residues MACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEI NAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKA AGTAAHVPPVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTH KLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEG YFPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSS PPCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGT FIAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFRFHEEPDGSWHVTA VPLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDE LFKRIKRT >Mature_647_residues ACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEIN AGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKAA GTAAHVPPVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTHK LTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEGY FPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSSP PCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGTF IAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTELSPAGFRFHEEPDGSWHVTAV PLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDEL FKRIKRT
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=340, Percent_Identity=30.5882352941176, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4505913, Length=369, Percent_Identity=26.8292682926829, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI189458898, Length=169, Percent_Identity=36.6863905325444, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI4505911, Length=169, Percent_Identity=36.6863905325444, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI189458896, Length=169, Percent_Identity=36.6863905325444, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI310128478, Length=175, Percent_Identity=36.5714285714286, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI91992160, Length=219, Percent_Identity=29.6803652968037, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI91992162, Length=219, Percent_Identity=29.6803652968037, Blast_Score=71, Evalue=4e-12, Organism=Escherichia coli, GI1790612, Length=617, Percent_Identity=30.9562398703404, Blast_Score=182, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71991825, Length=337, Percent_Identity=30.5637982195846, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17562796, Length=177, Percent_Identity=29.9435028248588, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323819, Length=337, Percent_Identity=30.5637982195846, Blast_Score=143, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6324247, Length=378, Percent_Identity=26.984126984127, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6325093, Length=310, Percent_Identity=25.1612903225806, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323063, Length=355, Percent_Identity=27.3239436619718, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI17136968, Length=336, Percent_Identity=30.6547619047619, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI17136970, Length=184, Percent_Identity=32.6086956521739, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 71233; Mature: 71102
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASV CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH VRELLENALDAGATKIHLEINAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDL HHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHEEEEECCCCCHHCCCHHHH LQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKAAGTAAHVPPVPQGTEAGVLE HHHHHCCCCHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC PASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTH CCCCCCCCEEEHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCE KLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFV EEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHCCCEEEEE NGRRIFDYGLVQALVLGSEGYFPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHI CCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHH RHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSSPPCTGVREEPAAPCAHTPRY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCE FIAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTE EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHC LSPAGFRFHEEPDGSWHVTAVPLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSAC CCCCCCEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC KDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDELFKRIKRT CCCCEECHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCHHHHHHHHCC >Mature Secondary Structure ACAKRATGAALRQNAGAGCLRSGKGFSMHETSYKPIHRLSPDTAKKIAAGEVIERPASV CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH VRELLENALDAGATKIHLEINAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISSADDL HHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHEEEEECCCCCHHCCCHHHH LQLRTLGFRGEALASIAAVSRLHLTSTRSGPLAWHYQPKAAGTAAHVPPVPQGTEAGVLE HHHHHCCCCHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC PASLERGTVVRVEQLFENFPARKRFLGRQSAETTLCRSALIDVSLAHHPVEFRFTVDGTH CCCCCCCCEEEHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCE KLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGDCSFHFHLVLSEPAICRRERRGIFTFV EEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHCCCEEEEE NGRRIFDYGLVQALVLGSEGYFPNGTFPVACLFLTVNSERIDFNIHPAKKEVHLQDYAHI CCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHH RHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQGNAPTHSSPPCTGVREEPAAPCAHTPRY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESLFPLPVQHAHLLPPSPPHISCEHARDCTHPAPAAEGDAPVHNHTHTGAFKVLGQVAGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCE FIAVERNNALYLIDQHAAHERIIFDTLQRNLGTAQILLIPYHIHPRSDEEARIMHRACTE EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHC LSPAGFRFHEEPDGSWHVTAVPLHWRGSEEQLAHDILYSGKNAHDILRHVLATCACRSAC CCCCCCEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC KDGTILDDATLHSLVEQAFALPQSRCPHGRPIWIVIGRDELFKRIKRT CCCCEECHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]