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The map label for this gene is 189025462

Identifier: 189025462

GI number: 189025462

Start: 238584

End: 239417

Strand: Direct

Name: 189025462

Synonym: TPASS_0229

Alternate gene names: NA

Gene position: 238584-239417 (Clockwise)

Preceding gene: 189025458

Following gene: 189025463

Centisome position: 20.94

GC content: 55.52

Gene sequence:

>834_bases
ATGCAAGGATCGGGTACCGTCATGTACGCAGTTTATGGTAGGCTCAGTCCTATGCACGCTGGGGACAGAGAGAGTATCGC
ACGCTTCGTGCGTGTGGTGCGCGATTGTCTGGATTTGTTTCGCACCGAGGGTATTGGGCCCCGTCCTAGGAATGATTCGG
TAATTTTACCGAATGCTGCGTGTTCACCGCGTAATCATGCAGGAAAGCGTGCGCAGAGCACTGCCGATGCGTGTGTGAGA
AGCAGTGACGGGTCTGTATACACGGACGAAACCTTGCGCGAGGAAATTTTTGCATGCCGTGCGTGTGAATTGTATCAACG
GCGTACACATGCGGTGGTGGGAGAGGGTGTTGCAGACGCAGACGTGCTCGTCGTTGGGGAGGCCCCTGGAGCGGAAGAAG
ATCGAAGCGGTCGTCCGTTCGTAGGACGGTCAGGTAAATTGCTGGACGCAATGCTTGCGGCGATTGGACTTTCGCGTCAG
CAAAATTGTTATATCACCAATGTGGTTAAGTGCCGGCCGCCAAGGAACCGCACACCAACACCCCACGAGACTGCCTGTTG
TGCACGGTTCCTCCATGCGCATCTTACGCTGCATCGCCCGTGTGCTATTTTGGTGCTCGGCCGCTGCGCCGCACAGCACA
TGCTCCAAACAACCGATGGTATTGGCAAGTTGCGCGGGCGCTTTTTTACCTATCAGGGGATTCCCCTTCTGGCTACGTAC
CATCCGAGTGCGTTGTTACGGGATGAAGCGCTGAAACGTCCGGCGTGGGAGGATCTCAAAACGTTTCGTGCACGGTTGCT
GCAGTTGAAGCAGGACGCACACATGCCAATATAA

Upstream 100 bases:

>100_bases
GTATAGTTTTTAACAGACTTACCCGAACGGCTGCCAGGTGCGTACGCGTCGGTTCGTTCCCACTGTGCGCGGGCAGAGCT
CGTGTAGTGTCTATTGACAG

Downstream 100 bases:

>100_bases
AATCATGGCGCCGTGGCTTGAGCTTGTTTTTGACGTTCCACTGGATAAAAGCTTTACGTACCGTGCGTGTGCTGCCCACG
CGGGTGAGGCACTCGTGGGT

Product: DNA polymerase, bacteriophage-type

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; DNA Polymerase Domain-Containing Protein; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase C-Terminal; Uracil-DNA Glycosylase-Related Protein; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAACSPRNHAGKRAQSTADACVR
SSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQ
QNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI

Sequences:

>Translated_277_residues
MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAACSPRNHAGKRAQSTADACVR
SSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQ
QNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI
>Mature_277_residues
MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAACSPRNHAGKRAQSTADACVR
SSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADADVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQ
QNCYITNVVKCRPPRNRTPTPHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 30604; Mature: 30604

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAA
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCC
CSPRNHAGKRAQSTADACVRSSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADA
CCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQQNCYITNVVKCRPPRNRTPT
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCC
PHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEC
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGSGTVMYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAA
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCC
CSPRNHAGKRAQSTADACVRSSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADA
CCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVLVVGEAPGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQQNCYITNVVKCRPPRNRTPT
CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCC
PHETACCARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATY
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEC
HPSALLRDEALKRPAWEDLKTFRARLLQLKQDAHMPI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA